Gene : Thecc1EG020811 T. cacao v1.1

Defline:  (1 of 1) PTHR23308//PTHR23308:SF34 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // F16B3.3 PROTEIN Genomic Order:  2508
Name:  ? Thecc1EG020811 Secondary Identifier:  ? PAC:27452923

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020811 0.5kb upstream 0.5kb upstream 3524 true scaffold_4: 30351259-30354782 Theobroma cacao
Thecc1EG020811 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30351259-30351758 Theobroma cacao
Thecc1EG020811 0.5kb downstream 0.5kb downstream 3524 true scaffold_4: 30351759-30355282 Theobroma cacao
Thecc1EG020811 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30354783-30355282 Theobroma cacao
Thecc1EG020811 1.0kb upstream 1.0kb upstream 4024 true scaffold_4: 30350759-30354782 Theobroma cacao
Thecc1EG020811 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30350759-30351758 Theobroma cacao
Thecc1EG020811 1.0kb downstream 1.0kb downstream 4024 true scaffold_4: 30351759-30355782 Theobroma cacao
Thecc1EG020811 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30354783-30355782 Theobroma cacao
Thecc1EG020811 2.0kb upstream 2.0kb upstream 5024 true scaffold_4: 30349759-30354782 Theobroma cacao
Thecc1EG020811 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30349759-30351758 Theobroma cacao
Thecc1EG020811 2.0kb downstream 2.0kb downstream 5024 true scaffold_4: 30351759-30356782 Theobroma cacao
Thecc1EG020811 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30354783-30356782 Theobroma cacao
Thecc1EG020811 5.0kb upstream 5.0kb upstream 8024 true scaffold_4: 30346759-30354782 Theobroma cacao
Thecc1EG020811 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30346759-30351758 Theobroma cacao
Thecc1EG020811 5.0kb downstream 5.0kb downstream 8024 true scaffold_4: 30351759-30359782 Theobroma cacao
Thecc1EG020811 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30354783-30359782 Theobroma cacao
Thecc1EG020811 10.0kb upstream 10.0kb upstream 13024 true scaffold_4: 30341759-30354782 Theobroma cacao
Thecc1EG020811 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30341759-30351758 Theobroma cacao
Thecc1EG020811 10.0kb downstream 10.0kb downstream 13024 true scaffold_4: 30351759-30364782 Theobroma cacao
Thecc1EG020811 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30354783-30364782 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835413 5264 Brassicales-Malvales View MSA
124346973 5266 SBM View MSA
124243983 5268 Malvidae View MSA
124050335 5270 Rosid View MSA
123743781 5271 Pentapetalae View MSA
122792695 5272 Eudicot View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain