Gene : Thecc1EG020794 T. cacao v1.1

Defline:  (1 of 11) PF06886 - Targeting protein for Xklp2 (TPX2) (TPX2) Genomic Order:  2492
Name:  ? Thecc1EG020794 Secondary Identifier:  ? PAC:27456293

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020794 0.5kb upstream 0.5kb upstream 5614 true scaffold_4: 30267709-30273322 Theobroma cacao
Thecc1EG020794 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30272823-30273322 Theobroma cacao
Thecc1EG020794 0.5kb downstream 0.5kb downstream 5614 true scaffold_4: 30267209-30272822 Theobroma cacao
Thecc1EG020794 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30267209-30267708 Theobroma cacao
Thecc1EG020794 1.0kb upstream 1.0kb upstream 6114 true scaffold_4: 30267709-30273822 Theobroma cacao
Thecc1EG020794 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30272823-30273822 Theobroma cacao
Thecc1EG020794 1.0kb downstream 1.0kb downstream 6114 true scaffold_4: 30266709-30272822 Theobroma cacao
Thecc1EG020794 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30266709-30267708 Theobroma cacao
Thecc1EG020794 2.0kb upstream 2.0kb upstream 7114 true scaffold_4: 30267709-30274822 Theobroma cacao
Thecc1EG020794 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30272823-30274822 Theobroma cacao
Thecc1EG020794 2.0kb downstream 2.0kb downstream 7114 true scaffold_4: 30265709-30272822 Theobroma cacao
Thecc1EG020794 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30265709-30267708 Theobroma cacao
Thecc1EG020794 5.0kb upstream 5.0kb upstream 10114 true scaffold_4: 30267709-30277822 Theobroma cacao
Thecc1EG020794 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30272823-30277822 Theobroma cacao
Thecc1EG020794 5.0kb downstream 5.0kb downstream 10114 true scaffold_4: 30262709-30272822 Theobroma cacao
Thecc1EG020794 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30262709-30267708 Theobroma cacao
Thecc1EG020794 10.0kb upstream 10.0kb upstream 15114 true scaffold_4: 30267709-30282822 Theobroma cacao
Thecc1EG020794 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30272823-30282822 Theobroma cacao
Thecc1EG020794 10.0kb downstream 10.0kb downstream 15114 true scaffold_4: 30257709-30272822 Theobroma cacao
Thecc1EG020794 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30257709-30267708 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827565 5264 Brassicales-Malvales View MSA
124337363 5266 SBM View MSA
124237920 5268 Malvidae View MSA
124067460 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain