Gene : Thecc1EG021092 T. cacao v1.1
Defline:  PH-response transcription factor pacC/RIM101 (66%P) Genomic Order:  2753
Name:  ? Thecc1EG021092 Secondary Identifier:  ? PAC:27453105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021092 0.5kb upstream 0.5kb upstream 4191 true scaffold_4: 31600458-31604648 Theobroma cacao
Thecc1EG021092 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31600458-31600957 Theobroma cacao
Thecc1EG021092 0.5kb downstream 0.5kb downstream 4191 true scaffold_4: 31600958-31605148 Theobroma cacao
Thecc1EG021092 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31604649-31605148 Theobroma cacao
Thecc1EG021092 1.0kb upstream 1.0kb upstream 4691 true scaffold_4: 31599958-31604648 Theobroma cacao
Thecc1EG021092 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31599958-31600957 Theobroma cacao
Thecc1EG021092 1.0kb downstream 1.0kb downstream 4691 true scaffold_4: 31600958-31605648 Theobroma cacao
Thecc1EG021092 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31604649-31605648 Theobroma cacao
Thecc1EG021092 2.0kb upstream 2.0kb upstream 5691 true scaffold_4: 31598958-31604648 Theobroma cacao
Thecc1EG021092 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31598958-31600957 Theobroma cacao
Thecc1EG021092 2.0kb downstream 2.0kb downstream 5691 true scaffold_4: 31600958-31606648 Theobroma cacao
Thecc1EG021092 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31604649-31606648 Theobroma cacao
Thecc1EG021092 5.0kb upstream 5.0kb upstream 8691 true scaffold_4: 31595958-31604648 Theobroma cacao
Thecc1EG021092 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31595958-31600957 Theobroma cacao
Thecc1EG021092 5.0kb downstream 5.0kb downstream 8691 true scaffold_4: 31600958-31609648 Theobroma cacao
Thecc1EG021092 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31604649-31609648 Theobroma cacao
Thecc1EG021092 10.0kb upstream 10.0kb upstream 13691 true scaffold_4: 31590958-31604648 Theobroma cacao
Thecc1EG021092 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31590958-31600957 Theobroma cacao
Thecc1EG021092 10.0kb downstream 10.0kb downstream 13691 true scaffold_4: 31600958-31614648 Theobroma cacao
Thecc1EG021092 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31604649-31614648 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026247 5273 Angiosperm View MSA
123832603 5264 Brassicales-Malvales View MSA
124346455 5266 SBM View MSA
124241173 5268 Malvidae View MSA
124062678 5270 Rosid View MSA
123751382 5271 Pentapetalae View MSA
122788871 5272 Eudicot View MSA
121349608 5274 Embryophyte View MSA
123425538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain