Gene : Thecc1EG021050 T. cacao v1.1
Defline:  (1 of 2) PTHR11945:SF158 - MADS-BOX PROTEIN AGL87 Genomic Order:  2714
Name:  ? Thecc1EG021050 Secondary Identifier:  ? PAC:27455558
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021050 0.5kb upstream 0.5kb upstream 1551 true scaffold_4: 31436565-31438115 Theobroma cacao
Thecc1EG021050 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31436565-31437064 Theobroma cacao
Thecc1EG021050 0.5kb downstream 0.5kb downstream 1551 true scaffold_4: 31437065-31438615 Theobroma cacao
Thecc1EG021050 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31438116-31438615 Theobroma cacao
Thecc1EG021050 1.0kb upstream 1.0kb upstream 2051 true scaffold_4: 31436065-31438115 Theobroma cacao
Thecc1EG021050 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31436065-31437064 Theobroma cacao
Thecc1EG021050 1.0kb downstream 1.0kb downstream 2051 true scaffold_4: 31437065-31439115 Theobroma cacao
Thecc1EG021050 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31438116-31439115 Theobroma cacao
Thecc1EG021050 2.0kb upstream 2.0kb upstream 3051 true scaffold_4: 31435065-31438115 Theobroma cacao
Thecc1EG021050 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31435065-31437064 Theobroma cacao
Thecc1EG021050 2.0kb downstream 2.0kb downstream 3051 true scaffold_4: 31437065-31440115 Theobroma cacao
Thecc1EG021050 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31438116-31440115 Theobroma cacao
Thecc1EG021050 5.0kb upstream 5.0kb upstream 6051 true scaffold_4: 31432065-31438115 Theobroma cacao
Thecc1EG021050 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31432065-31437064 Theobroma cacao
Thecc1EG021050 5.0kb downstream 5.0kb downstream 6051 true scaffold_4: 31437065-31443115 Theobroma cacao
Thecc1EG021050 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31438116-31443115 Theobroma cacao
Thecc1EG021050 10.0kb upstream 10.0kb upstream 11051 true scaffold_4: 31427065-31438115 Theobroma cacao
Thecc1EG021050 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31427065-31437064 Theobroma cacao
Thecc1EG021050 10.0kb downstream 10.0kb downstream 11051 true scaffold_4: 31437065-31448115 Theobroma cacao
Thecc1EG021050 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31438116-31448115 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343847 5266 SBM View MSA
123837702 5264 Brassicales-Malvales View MSA
124238498 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain