Gene : Thecc1EG021019 T. cacao v1.1
Defline:  (1 of 1) K02434 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B (gatB, PET112) Genomic Order:  2685
Name:  ? Thecc1EG021019 Secondary Identifier:  ? PAC:27456303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5921 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021019 0.5kb upstream 0.5kb upstream 6610 true scaffold_4: 31313232-31319841 Theobroma cacao
Thecc1EG021019 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31313232-31313731 Theobroma cacao
Thecc1EG021019 0.5kb downstream 0.5kb downstream 6610 true scaffold_4: 31313732-31320341 Theobroma cacao
Thecc1EG021019 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31319842-31320341 Theobroma cacao
Thecc1EG021019 1.0kb upstream 1.0kb upstream 7110 true scaffold_4: 31312732-31319841 Theobroma cacao
Thecc1EG021019 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31312732-31313731 Theobroma cacao
Thecc1EG021019 1.0kb downstream 1.0kb downstream 7110 true scaffold_4: 31313732-31320841 Theobroma cacao
Thecc1EG021019 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31319842-31320841 Theobroma cacao
Thecc1EG021019 2.0kb upstream 2.0kb upstream 8110 true scaffold_4: 31311732-31319841 Theobroma cacao
Thecc1EG021019 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31311732-31313731 Theobroma cacao
Thecc1EG021019 2.0kb downstream 2.0kb downstream 8110 true scaffold_4: 31313732-31321841 Theobroma cacao
Thecc1EG021019 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31319842-31321841 Theobroma cacao
Thecc1EG021019 5.0kb upstream 5.0kb upstream 11110 true scaffold_4: 31308732-31319841 Theobroma cacao
Thecc1EG021019 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31308732-31313731 Theobroma cacao
Thecc1EG021019 5.0kb downstream 5.0kb downstream 11110 true scaffold_4: 31313732-31324841 Theobroma cacao
Thecc1EG021019 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31319842-31324841 Theobroma cacao
Thecc1EG021019 10.0kb upstream 10.0kb upstream 16110 true scaffold_4: 31303732-31319841 Theobroma cacao
Thecc1EG021019 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31303732-31313731 Theobroma cacao
Thecc1EG021019 10.0kb downstream 10.0kb downstream 16110 true scaffold_4: 31313732-31329841 Theobroma cacao
Thecc1EG021019 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31319842-31329841 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832013 5264 Brassicales-Malvales View MSA
124339604 5266 SBM View MSA
124241399 5268 Malvidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain