Gene : Thecc1EG021007 T. cacao v1.1

Defline:  (1 of 2) PTHR10693//PTHR10693:SF29 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // GB|AAD20086.1 Genomic Order:  2674
Name:  ? Thecc1EG021007 Secondary Identifier:  ? PAC:27452957

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021007 0.5kb upstream 0.5kb upstream 5407 true scaffold_4: 31272706-31278112 Theobroma cacao
Thecc1EG021007 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31272706-31273205 Theobroma cacao
Thecc1EG021007 0.5kb downstream 0.5kb downstream 5407 true scaffold_4: 31273206-31278612 Theobroma cacao
Thecc1EG021007 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31278113-31278612 Theobroma cacao
Thecc1EG021007 1.0kb upstream 1.0kb upstream 5907 true scaffold_4: 31272206-31278112 Theobroma cacao
Thecc1EG021007 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31272206-31273205 Theobroma cacao
Thecc1EG021007 1.0kb downstream 1.0kb downstream 5907 true scaffold_4: 31273206-31279112 Theobroma cacao
Thecc1EG021007 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31278113-31279112 Theobroma cacao
Thecc1EG021007 2.0kb upstream 2.0kb upstream 6907 true scaffold_4: 31271206-31278112 Theobroma cacao
Thecc1EG021007 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31271206-31273205 Theobroma cacao
Thecc1EG021007 2.0kb downstream 2.0kb downstream 6907 true scaffold_4: 31273206-31280112 Theobroma cacao
Thecc1EG021007 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31278113-31280112 Theobroma cacao
Thecc1EG021007 5.0kb upstream 5.0kb upstream 9907 true scaffold_4: 31268206-31278112 Theobroma cacao
Thecc1EG021007 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31268206-31273205 Theobroma cacao
Thecc1EG021007 5.0kb downstream 5.0kb downstream 9907 true scaffold_4: 31273206-31283112 Theobroma cacao
Thecc1EG021007 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31278113-31283112 Theobroma cacao
Thecc1EG021007 10.0kb upstream 10.0kb upstream 14907 true scaffold_4: 31263206-31278112 Theobroma cacao
Thecc1EG021007 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31263206-31273205 Theobroma cacao
Thecc1EG021007 10.0kb downstream 10.0kb downstream 14907 true scaffold_4: 31273206-31288112 Theobroma cacao
Thecc1EG021007 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31278113-31288112 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827113 5264 Brassicales-Malvales View MSA
124348718 5266 SBM View MSA
124253455 5268 Malvidae View MSA
124070794 5270 Rosid View MSA
123747329 5271 Pentapetalae View MSA
122793510 5272 Eudicot View MSA
122050704 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain