Gene : Thecc1EG020979 T. cacao v1.1
Defline:  (1 of 3) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  2653
Name:  ? Thecc1EG020979 Secondary Identifier:  ? PAC:27452608
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4942 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020979 0.5kb upstream 0.5kb upstream 6676 true scaffold_4: 31153657-31160332 Theobroma cacao
Thecc1EG020979 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31159833-31160332 Theobroma cacao
Thecc1EG020979 0.5kb downstream 0.5kb downstream 6676 true scaffold_4: 31153157-31159832 Theobroma cacao
Thecc1EG020979 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31153157-31153656 Theobroma cacao
Thecc1EG020979 1.0kb upstream 1.0kb upstream 7176 true scaffold_4: 31153657-31160832 Theobroma cacao
Thecc1EG020979 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31159833-31160832 Theobroma cacao
Thecc1EG020979 1.0kb downstream 1.0kb downstream 7176 true scaffold_4: 31152657-31159832 Theobroma cacao
Thecc1EG020979 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31152657-31153656 Theobroma cacao
Thecc1EG020979 2.0kb upstream 2.0kb upstream 8176 true scaffold_4: 31153657-31161832 Theobroma cacao
Thecc1EG020979 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31159833-31161832 Theobroma cacao
Thecc1EG020979 2.0kb downstream 2.0kb downstream 8176 true scaffold_4: 31151657-31159832 Theobroma cacao
Thecc1EG020979 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31151657-31153656 Theobroma cacao
Thecc1EG020979 5.0kb upstream 5.0kb upstream 11176 true scaffold_4: 31153657-31164832 Theobroma cacao
Thecc1EG020979 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31159833-31164832 Theobroma cacao
Thecc1EG020979 5.0kb downstream 5.0kb downstream 11176 true scaffold_4: 31148657-31159832 Theobroma cacao
Thecc1EG020979 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31148657-31153656 Theobroma cacao
Thecc1EG020979 10.0kb upstream 10.0kb upstream 16176 true scaffold_4: 31153657-31169832 Theobroma cacao
Thecc1EG020979 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31159833-31169832 Theobroma cacao
Thecc1EG020979 10.0kb downstream 10.0kb downstream 16176 true scaffold_4: 31143657-31159832 Theobroma cacao
Thecc1EG020979 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31143657-31153656 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836708 5264 Brassicales-Malvales View MSA
124347136 5266 SBM View MSA
124247291 5268 Malvidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain