Gene : Thecc1EG021262 T. cacao v1.1
Defline:  (1 of 1) PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  2912
Name:  ? Thecc1EG021262 Secondary Identifier:  ? PAC:27455364
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021262 0.5kb upstream 0.5kb upstream 3456 true scaffold_4: 32380727-32384182 Theobroma cacao
Thecc1EG021262 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32380727-32381226 Theobroma cacao
Thecc1EG021262 0.5kb downstream 0.5kb downstream 3456 true scaffold_4: 32381227-32384682 Theobroma cacao
Thecc1EG021262 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32384183-32384682 Theobroma cacao
Thecc1EG021262 1.0kb upstream 1.0kb upstream 3956 true scaffold_4: 32380227-32384182 Theobroma cacao
Thecc1EG021262 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32380227-32381226 Theobroma cacao
Thecc1EG021262 1.0kb downstream 1.0kb downstream 3956 true scaffold_4: 32381227-32385182 Theobroma cacao
Thecc1EG021262 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32384183-32385182 Theobroma cacao
Thecc1EG021262 2.0kb upstream 2.0kb upstream 4956 true scaffold_4: 32379227-32384182 Theobroma cacao
Thecc1EG021262 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32379227-32381226 Theobroma cacao
Thecc1EG021262 2.0kb downstream 2.0kb downstream 4956 true scaffold_4: 32381227-32386182 Theobroma cacao
Thecc1EG021262 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32384183-32386182 Theobroma cacao
Thecc1EG021262 5.0kb upstream 5.0kb upstream 7956 true scaffold_4: 32376227-32384182 Theobroma cacao
Thecc1EG021262 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32376227-32381226 Theobroma cacao
Thecc1EG021262 5.0kb downstream 5.0kb downstream 7956 true scaffold_4: 32381227-32389182 Theobroma cacao
Thecc1EG021262 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32384183-32389182 Theobroma cacao
Thecc1EG021262 10.0kb upstream 10.0kb upstream 12956 true scaffold_4: 32371227-32384182 Theobroma cacao
Thecc1EG021262 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32371227-32381226 Theobroma cacao
Thecc1EG021262 10.0kb downstream 10.0kb downstream 12956 true scaffold_4: 32381227-32394182 Theobroma cacao
Thecc1EG021262 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32384183-32394182 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
123836853 5264 Brassicales-Malvales View MSA
124346842 5266 SBM View MSA
124246437 5268 Malvidae View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain