Gene : Thecc1EG021238 T. cacao v1.1
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  2888
Name:  ? Thecc1EG021238 Secondary Identifier:  ? PAC:27453084
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ILEUDEG-PWY Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5137 Theobroma cacao pathologic  
Tcacao PWY-5138 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-6435 Theobroma cacao pathologic  
Tcacao PWY-6837 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-735 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  
Tcacao VALDEG-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021238 0.5kb upstream 0.5kb upstream 7659 true scaffold_4: 32264591-32272249 Theobroma cacao
Thecc1EG021238 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32271750-32272249 Theobroma cacao
Thecc1EG021238 0.5kb downstream 0.5kb downstream 7659 true scaffold_4: 32264091-32271749 Theobroma cacao
Thecc1EG021238 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32264091-32264590 Theobroma cacao
Thecc1EG021238 1.0kb upstream 1.0kb upstream 8159 true scaffold_4: 32264591-32272749 Theobroma cacao
Thecc1EG021238 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32271750-32272749 Theobroma cacao
Thecc1EG021238 1.0kb downstream 1.0kb downstream 8159 true scaffold_4: 32263591-32271749 Theobroma cacao
Thecc1EG021238 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32263591-32264590 Theobroma cacao
Thecc1EG021238 2.0kb upstream 2.0kb upstream 9159 true scaffold_4: 32264591-32273749 Theobroma cacao
Thecc1EG021238 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32271750-32273749 Theobroma cacao
Thecc1EG021238 2.0kb downstream 2.0kb downstream 9159 true scaffold_4: 32262591-32271749 Theobroma cacao
Thecc1EG021238 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32262591-32264590 Theobroma cacao
Thecc1EG021238 5.0kb upstream 5.0kb upstream 12159 true scaffold_4: 32264591-32276749 Theobroma cacao
Thecc1EG021238 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32271750-32276749 Theobroma cacao
Thecc1EG021238 5.0kb downstream 5.0kb downstream 12159 true scaffold_4: 32259591-32271749 Theobroma cacao
Thecc1EG021238 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32259591-32264590 Theobroma cacao
Thecc1EG021238 10.0kb upstream 10.0kb upstream 17159 true scaffold_4: 32264591-32281749 Theobroma cacao
Thecc1EG021238 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32271750-32281749 Theobroma cacao
Thecc1EG021238 10.0kb downstream 10.0kb downstream 17159 true scaffold_4: 32254591-32271749 Theobroma cacao
Thecc1EG021238 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32254591-32264590 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830316 5264 Brassicales-Malvales View MSA
124341284 5266 SBM View MSA
124238455 5268 Malvidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain