Gene : Thecc1EG021249 T. cacao v1.1
Defline:  (1 of 2) PTHR14155//PTHR14155:SF117 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL41-RELATED Genomic Order:  2899
Name:  ? Thecc1EG021249 Secondary Identifier:  ? PAC:27452294
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021249 0.5kb upstream 0.5kb upstream 2152 true scaffold_4: 32330854-32333005 Theobroma cacao
Thecc1EG021249 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32330854-32331353 Theobroma cacao
Thecc1EG021249 0.5kb downstream 0.5kb downstream 2152 true scaffold_4: 32331354-32333505 Theobroma cacao
Thecc1EG021249 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32333006-32333505 Theobroma cacao
Thecc1EG021249 1.0kb upstream 1.0kb upstream 2652 true scaffold_4: 32330354-32333005 Theobroma cacao
Thecc1EG021249 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32330354-32331353 Theobroma cacao
Thecc1EG021249 1.0kb downstream 1.0kb downstream 2652 true scaffold_4: 32331354-32334005 Theobroma cacao
Thecc1EG021249 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32333006-32334005 Theobroma cacao
Thecc1EG021249 2.0kb upstream 2.0kb upstream 3652 true scaffold_4: 32329354-32333005 Theobroma cacao
Thecc1EG021249 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32329354-32331353 Theobroma cacao
Thecc1EG021249 2.0kb downstream 2.0kb downstream 3652 true scaffold_4: 32331354-32335005 Theobroma cacao
Thecc1EG021249 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32333006-32335005 Theobroma cacao
Thecc1EG021249 5.0kb upstream 5.0kb upstream 6652 true scaffold_4: 32326354-32333005 Theobroma cacao
Thecc1EG021249 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32326354-32331353 Theobroma cacao
Thecc1EG021249 5.0kb downstream 5.0kb downstream 6652 true scaffold_4: 32331354-32338005 Theobroma cacao
Thecc1EG021249 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32333006-32338005 Theobroma cacao
Thecc1EG021249 10.0kb upstream 10.0kb upstream 11652 true scaffold_4: 32321354-32333005 Theobroma cacao
Thecc1EG021249 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32321354-32331353 Theobroma cacao
Thecc1EG021249 10.0kb downstream 10.0kb downstream 11652 true scaffold_4: 32331354-32343005 Theobroma cacao
Thecc1EG021249 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32333006-32343005 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349697 5266 SBM View MSA
123827609 5264 Brassicales-Malvales View MSA
124253774 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain