Gene : Thecc1EG021212 T. cacao v1.1
Defline:  (1 of 30) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  2865
Name:  ? Thecc1EG021212 Secondary Identifier:  ? PAC:27453844
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021212 0.5kb upstream 0.5kb upstream 4640 true scaffold_4: 32151238-32155877 Theobroma cacao
Thecc1EG021212 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32155378-32155877 Theobroma cacao
Thecc1EG021212 0.5kb downstream 0.5kb downstream 4640 true scaffold_4: 32150738-32155377 Theobroma cacao
Thecc1EG021212 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32150738-32151237 Theobroma cacao
Thecc1EG021212 1.0kb upstream 1.0kb upstream 5140 true scaffold_4: 32151238-32156377 Theobroma cacao
Thecc1EG021212 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32155378-32156377 Theobroma cacao
Thecc1EG021212 1.0kb downstream 1.0kb downstream 5140 true scaffold_4: 32150238-32155377 Theobroma cacao
Thecc1EG021212 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32150238-32151237 Theobroma cacao
Thecc1EG021212 2.0kb upstream 2.0kb upstream 6140 true scaffold_4: 32151238-32157377 Theobroma cacao
Thecc1EG021212 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32155378-32157377 Theobroma cacao
Thecc1EG021212 2.0kb downstream 2.0kb downstream 6140 true scaffold_4: 32149238-32155377 Theobroma cacao
Thecc1EG021212 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32149238-32151237 Theobroma cacao
Thecc1EG021212 5.0kb upstream 5.0kb upstream 9140 true scaffold_4: 32151238-32160377 Theobroma cacao
Thecc1EG021212 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32155378-32160377 Theobroma cacao
Thecc1EG021212 5.0kb downstream 5.0kb downstream 9140 true scaffold_4: 32146238-32155377 Theobroma cacao
Thecc1EG021212 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32146238-32151237 Theobroma cacao
Thecc1EG021212 10.0kb upstream 10.0kb upstream 14140 true scaffold_4: 32151238-32165377 Theobroma cacao
Thecc1EG021212 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32155378-32165377 Theobroma cacao
Thecc1EG021212 10.0kb downstream 10.0kb downstream 14140 true scaffold_4: 32141238-32155377 Theobroma cacao
Thecc1EG021212 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32141238-32151237 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830723 5264 Brassicales-Malvales View MSA
124341059 5266 SBM View MSA
124240602 5268 Malvidae View MSA
124068825 5270 Rosid View MSA
123736468 5271 Pentapetalae View MSA
122787025 5272 Eudicot View MSA
122042185 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain