Gene : Thecc1EG021168 T. cacao v1.1
Defline:  (1 of 1) PTHR21689//PTHR21689:SF2 - LIN-9 // PROTEIN LIN-9 HOMOLOG Genomic Order:  2822
Name:  ? Thecc1EG021168 Secondary Identifier:  ? PAC:27454051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021168 0.5kb upstream 0.5kb upstream 11201 true scaffold_4: 31964576-31975776 Theobroma cacao
Thecc1EG021168 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31964576-31965075 Theobroma cacao
Thecc1EG021168 0.5kb downstream 0.5kb downstream 11201 true scaffold_4: 31965076-31976276 Theobroma cacao
Thecc1EG021168 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31975777-31976276 Theobroma cacao
Thecc1EG021168 1.0kb upstream 1.0kb upstream 11701 true scaffold_4: 31964076-31975776 Theobroma cacao
Thecc1EG021168 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31964076-31965075 Theobroma cacao
Thecc1EG021168 1.0kb downstream 1.0kb downstream 11701 true scaffold_4: 31965076-31976776 Theobroma cacao
Thecc1EG021168 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31975777-31976776 Theobroma cacao
Thecc1EG021168 2.0kb upstream 2.0kb upstream 12701 true scaffold_4: 31963076-31975776 Theobroma cacao
Thecc1EG021168 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31963076-31965075 Theobroma cacao
Thecc1EG021168 2.0kb downstream 2.0kb downstream 12701 true scaffold_4: 31965076-31977776 Theobroma cacao
Thecc1EG021168 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31975777-31977776 Theobroma cacao
Thecc1EG021168 5.0kb upstream 5.0kb upstream 15701 true scaffold_4: 31960076-31975776 Theobroma cacao
Thecc1EG021168 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31960076-31965075 Theobroma cacao
Thecc1EG021168 5.0kb downstream 5.0kb downstream 15701 true scaffold_4: 31965076-31980776 Theobroma cacao
Thecc1EG021168 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31975777-31980776 Theobroma cacao
Thecc1EG021168 10.0kb upstream 10.0kb upstream 20701 true scaffold_4: 31955076-31975776 Theobroma cacao
Thecc1EG021168 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31955076-31965075 Theobroma cacao
Thecc1EG021168 10.0kb downstream 10.0kb downstream 20701 true scaffold_4: 31965076-31985776 Theobroma cacao
Thecc1EG021168 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31975777-31985776 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040981 5273 Angiosperm View MSA
123838016 5264 Brassicales-Malvales View MSA
124350607 5266 SBM View MSA
124253154 5268 Malvidae View MSA
124072139 5270 Rosid View MSA
123744019 5271 Pentapetalae View MSA
122796198 5272 Eudicot View MSA
121349318 5274 Embryophyte View MSA
123424502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain