Gene : Thecc1EG021371 T. cacao v1.1
Defline:  (1 of 2) PTHR23118//PTHR23118:SF3//PTHR23118:SF6 - ATP-CITRATE SYNTHASE // SUBFAMILY NOT NAMED // ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 1 Genomic Order:  3013
Name:  ? Thecc1EG021371 Secondary Identifier:  ? PAC:27455745
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5172 Theobroma cacao pathologic  
Tcacao PWY-5173 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021371 0.5kb upstream 0.5kb upstream 6458 true scaffold_4: 32784549-32791006 Theobroma cacao
Thecc1EG021371 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32784549-32785048 Theobroma cacao
Thecc1EG021371 0.5kb downstream 0.5kb downstream 6458 true scaffold_4: 32785049-32791506 Theobroma cacao
Thecc1EG021371 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32791007-32791506 Theobroma cacao
Thecc1EG021371 1.0kb upstream 1.0kb upstream 6958 true scaffold_4: 32784049-32791006 Theobroma cacao
Thecc1EG021371 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32784049-32785048 Theobroma cacao
Thecc1EG021371 1.0kb downstream 1.0kb downstream 6958 true scaffold_4: 32785049-32792006 Theobroma cacao
Thecc1EG021371 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32791007-32792006 Theobroma cacao
Thecc1EG021371 2.0kb upstream 2.0kb upstream 7958 true scaffold_4: 32783049-32791006 Theobroma cacao
Thecc1EG021371 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32783049-32785048 Theobroma cacao
Thecc1EG021371 2.0kb downstream 2.0kb downstream 7958 true scaffold_4: 32785049-32793006 Theobroma cacao
Thecc1EG021371 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32791007-32793006 Theobroma cacao
Thecc1EG021371 5.0kb upstream 5.0kb upstream 10958 true scaffold_4: 32780049-32791006 Theobroma cacao
Thecc1EG021371 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32780049-32785048 Theobroma cacao
Thecc1EG021371 5.0kb downstream 5.0kb downstream 10958 true scaffold_4: 32785049-32796006 Theobroma cacao
Thecc1EG021371 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32791007-32796006 Theobroma cacao
Thecc1EG021371 10.0kb upstream 10.0kb upstream 15958 true scaffold_4: 32775049-32791006 Theobroma cacao
Thecc1EG021371 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32775049-32785048 Theobroma cacao
Thecc1EG021371 10.0kb downstream 10.0kb downstream 15958 true scaffold_4: 32785049-32801006 Theobroma cacao
Thecc1EG021371 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32791007-32801006 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838155 5264 Brassicales-Malvales View MSA
124340506 5266 SBM View MSA
124250755 5268 Malvidae View MSA
124062088 5270 Rosid View MSA
123736971 5271 Pentapetalae View MSA
122787632 5272 Eudicot View MSA
122045238 5273 Angiosperm View MSA
121345896 5274 Embryophyte View MSA
123427786 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain