Gene : Thecc1EG021349 T. cacao v1.1
Defline:  (1 of 3) 2.5.1.43 - Nicotianamine synthase Genomic Order:  2991
Name:  ? Thecc1EG021349 Secondary Identifier:  ? PAC:27454409
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5957 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021349 0.5kb upstream 0.5kb upstream 3149 true scaffold_4: 32704653-32707801 Theobroma cacao
Thecc1EG021349 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32704653-32705152 Theobroma cacao
Thecc1EG021349 0.5kb downstream 0.5kb downstream 3149 true scaffold_4: 32705153-32708301 Theobroma cacao
Thecc1EG021349 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32707802-32708301 Theobroma cacao
Thecc1EG021349 1.0kb upstream 1.0kb upstream 3649 true scaffold_4: 32704153-32707801 Theobroma cacao
Thecc1EG021349 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32704153-32705152 Theobroma cacao
Thecc1EG021349 1.0kb downstream 1.0kb downstream 3649 true scaffold_4: 32705153-32708801 Theobroma cacao
Thecc1EG021349 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32707802-32708801 Theobroma cacao
Thecc1EG021349 2.0kb upstream 2.0kb upstream 4649 true scaffold_4: 32703153-32707801 Theobroma cacao
Thecc1EG021349 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32703153-32705152 Theobroma cacao
Thecc1EG021349 2.0kb downstream 2.0kb downstream 4649 true scaffold_4: 32705153-32709801 Theobroma cacao
Thecc1EG021349 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32707802-32709801 Theobroma cacao
Thecc1EG021349 5.0kb upstream 5.0kb upstream 7649 true scaffold_4: 32700153-32707801 Theobroma cacao
Thecc1EG021349 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32700153-32705152 Theobroma cacao
Thecc1EG021349 5.0kb downstream 5.0kb downstream 7649 true scaffold_4: 32705153-32712801 Theobroma cacao
Thecc1EG021349 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32707802-32712801 Theobroma cacao
Thecc1EG021349 10.0kb upstream 10.0kb upstream 12649 true scaffold_4: 32695153-32707801 Theobroma cacao
Thecc1EG021349 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32695153-32705152 Theobroma cacao
Thecc1EG021349 10.0kb downstream 10.0kb downstream 12649 true scaffold_4: 32705153-32717801 Theobroma cacao
Thecc1EG021349 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32707802-32717801 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839156 5264 Brassicales-Malvales View MSA
124346963 5266 SBM View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain