Gene : Thecc1EG021294 T. cacao v1.1
Defline:  (1 of 33) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2940
Name:  ? Thecc1EG021294 Secondary Identifier:  ? PAC:27452446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021294 0.5kb upstream 0.5kb upstream 1601 true scaffold_4: 32494948-32496548 Theobroma cacao
Thecc1EG021294 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32494948-32495447 Theobroma cacao
Thecc1EG021294 0.5kb downstream 0.5kb downstream 1601 true scaffold_4: 32495448-32497048 Theobroma cacao
Thecc1EG021294 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32496549-32497048 Theobroma cacao
Thecc1EG021294 1.0kb upstream 1.0kb upstream 2101 true scaffold_4: 32494448-32496548 Theobroma cacao
Thecc1EG021294 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32494448-32495447 Theobroma cacao
Thecc1EG021294 1.0kb downstream 1.0kb downstream 2101 true scaffold_4: 32495448-32497548 Theobroma cacao
Thecc1EG021294 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32496549-32497548 Theobroma cacao
Thecc1EG021294 2.0kb upstream 2.0kb upstream 3101 true scaffold_4: 32493448-32496548 Theobroma cacao
Thecc1EG021294 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32493448-32495447 Theobroma cacao
Thecc1EG021294 2.0kb downstream 2.0kb downstream 3101 true scaffold_4: 32495448-32498548 Theobroma cacao
Thecc1EG021294 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32496549-32498548 Theobroma cacao
Thecc1EG021294 5.0kb upstream 5.0kb upstream 6101 true scaffold_4: 32490448-32496548 Theobroma cacao
Thecc1EG021294 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32490448-32495447 Theobroma cacao
Thecc1EG021294 5.0kb downstream 5.0kb downstream 6101 true scaffold_4: 32495448-32501548 Theobroma cacao
Thecc1EG021294 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32496549-32501548 Theobroma cacao
Thecc1EG021294 10.0kb upstream 10.0kb upstream 11101 true scaffold_4: 32485448-32496548 Theobroma cacao
Thecc1EG021294 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32485448-32495447 Theobroma cacao
Thecc1EG021294 10.0kb downstream 10.0kb downstream 11101 true scaffold_4: 32495448-32506548 Theobroma cacao
Thecc1EG021294 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32496549-32506548 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827133 5264 Brassicales-Malvales View MSA
124351252 5266 SBM View MSA
124249501 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain