Gene : Thecc1EG021282 T. cacao v1.1
Defline:  (1 of 33) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2931
Name:  ? Thecc1EG021282 Secondary Identifier:  ? PAC:27456157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021282 0.5kb upstream 0.5kb upstream 1287 true scaffold_4: 32472553-32473839 Theobroma cacao
Thecc1EG021282 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32473340-32473839 Theobroma cacao
Thecc1EG021282 0.5kb downstream 0.5kb downstream 1287 true scaffold_4: 32472053-32473339 Theobroma cacao
Thecc1EG021282 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32472053-32472552 Theobroma cacao
Thecc1EG021282 1.0kb upstream 1.0kb upstream 1787 true scaffold_4: 32472553-32474339 Theobroma cacao
Thecc1EG021282 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32473340-32474339 Theobroma cacao
Thecc1EG021282 1.0kb downstream 1.0kb downstream 1787 true scaffold_4: 32471553-32473339 Theobroma cacao
Thecc1EG021282 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32471553-32472552 Theobroma cacao
Thecc1EG021282 2.0kb upstream 2.0kb upstream 2787 true scaffold_4: 32472553-32475339 Theobroma cacao
Thecc1EG021282 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32473340-32475339 Theobroma cacao
Thecc1EG021282 2.0kb downstream 2.0kb downstream 2787 true scaffold_4: 32470553-32473339 Theobroma cacao
Thecc1EG021282 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32470553-32472552 Theobroma cacao
Thecc1EG021282 5.0kb upstream 5.0kb upstream 5787 true scaffold_4: 32472553-32478339 Theobroma cacao
Thecc1EG021282 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32473340-32478339 Theobroma cacao
Thecc1EG021282 5.0kb downstream 5.0kb downstream 5787 true scaffold_4: 32467553-32473339 Theobroma cacao
Thecc1EG021282 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32467553-32472552 Theobroma cacao
Thecc1EG021282 10.0kb upstream 10.0kb upstream 10787 true scaffold_4: 32472553-32483339 Theobroma cacao
Thecc1EG021282 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32473340-32483339 Theobroma cacao
Thecc1EG021282 10.0kb downstream 10.0kb downstream 10787 true scaffold_4: 32462553-32473339 Theobroma cacao
Thecc1EG021282 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32462553-32472552 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826870 5264 Brassicales-Malvales View MSA
124351252 5266 SBM View MSA
124249501 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain