Gene : Thecc1EG021279 T. cacao v1.1
Defline:  (1 of 33) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2928
Name:  ? Thecc1EG021279 Secondary Identifier:  ? PAC:27455385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021279 0.5kb upstream 0.5kb upstream 1667 true scaffold_4: 32463079-32464745 Theobroma cacao
Thecc1EG021279 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32464246-32464745 Theobroma cacao
Thecc1EG021279 0.5kb downstream 0.5kb downstream 1667 true scaffold_4: 32462579-32464245 Theobroma cacao
Thecc1EG021279 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32462579-32463078 Theobroma cacao
Thecc1EG021279 1.0kb upstream 1.0kb upstream 2167 true scaffold_4: 32463079-32465245 Theobroma cacao
Thecc1EG021279 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32464246-32465245 Theobroma cacao
Thecc1EG021279 1.0kb downstream 1.0kb downstream 2167 true scaffold_4: 32462079-32464245 Theobroma cacao
Thecc1EG021279 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32462079-32463078 Theobroma cacao
Thecc1EG021279 2.0kb upstream 2.0kb upstream 3167 true scaffold_4: 32463079-32466245 Theobroma cacao
Thecc1EG021279 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32464246-32466245 Theobroma cacao
Thecc1EG021279 2.0kb downstream 2.0kb downstream 3167 true scaffold_4: 32461079-32464245 Theobroma cacao
Thecc1EG021279 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32461079-32463078 Theobroma cacao
Thecc1EG021279 5.0kb upstream 5.0kb upstream 6167 true scaffold_4: 32463079-32469245 Theobroma cacao
Thecc1EG021279 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32464246-32469245 Theobroma cacao
Thecc1EG021279 5.0kb downstream 5.0kb downstream 6167 true scaffold_4: 32458079-32464245 Theobroma cacao
Thecc1EG021279 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32458079-32463078 Theobroma cacao
Thecc1EG021279 10.0kb upstream 10.0kb upstream 11167 true scaffold_4: 32463079-32474245 Theobroma cacao
Thecc1EG021279 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32464246-32474245 Theobroma cacao
Thecc1EG021279 10.0kb downstream 10.0kb downstream 11167 true scaffold_4: 32453079-32464245 Theobroma cacao
Thecc1EG021279 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32453079-32463078 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826982 5264 Brassicales-Malvales View MSA
124348291 5266 SBM View MSA
124247046 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain