Gene : Thecc1EG021508 T. cacao v1.1
Defline:  (1 of 1) PTHR31342:SF12 - F11A17.16 Genomic Order:  3142
Name:  ? Thecc1EG021508 Secondary Identifier:  ? PAC:27452167
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021508 0.5kb upstream 0.5kb upstream 5347 true scaffold_4: 33410028-33415374 Theobroma cacao
Thecc1EG021508 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33410028-33410527 Theobroma cacao
Thecc1EG021508 0.5kb downstream 0.5kb downstream 5347 true scaffold_4: 33410528-33415874 Theobroma cacao
Thecc1EG021508 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33415375-33415874 Theobroma cacao
Thecc1EG021508 1.0kb upstream 1.0kb upstream 5847 true scaffold_4: 33409528-33415374 Theobroma cacao
Thecc1EG021508 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33409528-33410527 Theobroma cacao
Thecc1EG021508 1.0kb downstream 1.0kb downstream 5847 true scaffold_4: 33410528-33416374 Theobroma cacao
Thecc1EG021508 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33415375-33416374 Theobroma cacao
Thecc1EG021508 2.0kb upstream 2.0kb upstream 6847 true scaffold_4: 33408528-33415374 Theobroma cacao
Thecc1EG021508 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33408528-33410527 Theobroma cacao
Thecc1EG021508 2.0kb downstream 2.0kb downstream 6847 true scaffold_4: 33410528-33417374 Theobroma cacao
Thecc1EG021508 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33415375-33417374 Theobroma cacao
Thecc1EG021508 5.0kb upstream 5.0kb upstream 9847 true scaffold_4: 33405528-33415374 Theobroma cacao
Thecc1EG021508 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33405528-33410527 Theobroma cacao
Thecc1EG021508 5.0kb downstream 5.0kb downstream 9847 true scaffold_4: 33410528-33420374 Theobroma cacao
Thecc1EG021508 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33415375-33420374 Theobroma cacao
Thecc1EG021508 10.0kb upstream 10.0kb upstream 14847 true scaffold_4: 33400528-33415374 Theobroma cacao
Thecc1EG021508 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33400528-33410527 Theobroma cacao
Thecc1EG021508 10.0kb downstream 10.0kb downstream 14847 true scaffold_4: 33410528-33425374 Theobroma cacao
Thecc1EG021508 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33415375-33425374 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827778 5264 Brassicales-Malvales View MSA
124337881 5266 SBM View MSA
124238623 5268 Malvidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain