Gene : Thecc1EG021500 T. cacao v1.1
Defline:  (1 of 5) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  3134
Name:  ? Thecc1EG021500 Secondary Identifier:  ? PAC:27455233
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021500 0.5kb upstream 0.5kb upstream 5499 true scaffold_4: 33372580-33378078 Theobroma cacao
Thecc1EG021500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33377579-33378078 Theobroma cacao
Thecc1EG021500 0.5kb downstream 0.5kb downstream 5499 true scaffold_4: 33372080-33377578 Theobroma cacao
Thecc1EG021500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33372080-33372579 Theobroma cacao
Thecc1EG021500 1.0kb upstream 1.0kb upstream 5999 true scaffold_4: 33372580-33378578 Theobroma cacao
Thecc1EG021500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33377579-33378578 Theobroma cacao
Thecc1EG021500 1.0kb downstream 1.0kb downstream 5999 true scaffold_4: 33371580-33377578 Theobroma cacao
Thecc1EG021500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33371580-33372579 Theobroma cacao
Thecc1EG021500 2.0kb upstream 2.0kb upstream 6999 true scaffold_4: 33372580-33379578 Theobroma cacao
Thecc1EG021500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33377579-33379578 Theobroma cacao
Thecc1EG021500 2.0kb downstream 2.0kb downstream 6999 true scaffold_4: 33370580-33377578 Theobroma cacao
Thecc1EG021500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33370580-33372579 Theobroma cacao
Thecc1EG021500 5.0kb upstream 5.0kb upstream 9999 true scaffold_4: 33372580-33382578 Theobroma cacao
Thecc1EG021500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33377579-33382578 Theobroma cacao
Thecc1EG021500 5.0kb downstream 5.0kb downstream 9999 true scaffold_4: 33367580-33377578 Theobroma cacao
Thecc1EG021500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33367580-33372579 Theobroma cacao
Thecc1EG021500 10.0kb upstream 10.0kb upstream 14999 true scaffold_4: 33372580-33387578 Theobroma cacao
Thecc1EG021500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33377579-33387578 Theobroma cacao
Thecc1EG021500 10.0kb downstream 10.0kb downstream 14999 true scaffold_4: 33362580-33377578 Theobroma cacao
Thecc1EG021500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33362580-33372579 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837837 5264 Brassicales-Malvales View MSA
124339946 5266 SBM View MSA
124239535 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain