Gene : Thecc1EG021497 T. cacao v1.1
Defline:  (1 of 1) PTHR21262//PTHR21262:SF12 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  3131
Name:  ? Thecc1EG021497 Secondary Identifier:  ? PAC:27455486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021497 0.5kb upstream 0.5kb upstream 4206 true scaffold_4: 33358893-33363098 Theobroma cacao
Thecc1EG021497 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33358893-33359392 Theobroma cacao
Thecc1EG021497 0.5kb downstream 0.5kb downstream 4206 true scaffold_4: 33359393-33363598 Theobroma cacao
Thecc1EG021497 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33363099-33363598 Theobroma cacao
Thecc1EG021497 1.0kb upstream 1.0kb upstream 4706 true scaffold_4: 33358393-33363098 Theobroma cacao
Thecc1EG021497 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33358393-33359392 Theobroma cacao
Thecc1EG021497 1.0kb downstream 1.0kb downstream 4706 true scaffold_4: 33359393-33364098 Theobroma cacao
Thecc1EG021497 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33363099-33364098 Theobroma cacao
Thecc1EG021497 2.0kb upstream 2.0kb upstream 5706 true scaffold_4: 33357393-33363098 Theobroma cacao
Thecc1EG021497 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33357393-33359392 Theobroma cacao
Thecc1EG021497 2.0kb downstream 2.0kb downstream 5706 true scaffold_4: 33359393-33365098 Theobroma cacao
Thecc1EG021497 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33363099-33365098 Theobroma cacao
Thecc1EG021497 5.0kb upstream 5.0kb upstream 8706 true scaffold_4: 33354393-33363098 Theobroma cacao
Thecc1EG021497 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33354393-33359392 Theobroma cacao
Thecc1EG021497 5.0kb downstream 5.0kb downstream 8706 true scaffold_4: 33359393-33368098 Theobroma cacao
Thecc1EG021497 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33363099-33368098 Theobroma cacao
Thecc1EG021497 10.0kb upstream 10.0kb upstream 13706 true scaffold_4: 33349393-33363098 Theobroma cacao
Thecc1EG021497 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33349393-33359392 Theobroma cacao
Thecc1EG021497 10.0kb downstream 10.0kb downstream 13706 true scaffold_4: 33359393-33373098 Theobroma cacao
Thecc1EG021497 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33363099-33373098 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833199 5264 Brassicales-Malvales View MSA
124341515 5266 SBM View MSA
124238983 5268 Malvidae View MSA
124063676 5270 Rosid View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain