Gene : Thecc1EG021491 T. cacao v1.1
Defline:  (1 of 1) PTHR21686:SF12 - DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 Genomic Order:  3125
Name:  ? Thecc1EG021491 Secondary Identifier:  ? PAC:27454971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021491 0.5kb upstream 0.5kb upstream 2515 true scaffold_4: 33340382-33342896 Theobroma cacao
Thecc1EG021491 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33342397-33342896 Theobroma cacao
Thecc1EG021491 0.5kb downstream 0.5kb downstream 2515 true scaffold_4: 33339882-33342396 Theobroma cacao
Thecc1EG021491 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33339882-33340381 Theobroma cacao
Thecc1EG021491 1.0kb upstream 1.0kb upstream 3015 true scaffold_4: 33340382-33343396 Theobroma cacao
Thecc1EG021491 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33342397-33343396 Theobroma cacao
Thecc1EG021491 1.0kb downstream 1.0kb downstream 3015 true scaffold_4: 33339382-33342396 Theobroma cacao
Thecc1EG021491 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33339382-33340381 Theobroma cacao
Thecc1EG021491 2.0kb upstream 2.0kb upstream 4015 true scaffold_4: 33340382-33344396 Theobroma cacao
Thecc1EG021491 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33342397-33344396 Theobroma cacao
Thecc1EG021491 2.0kb downstream 2.0kb downstream 4015 true scaffold_4: 33338382-33342396 Theobroma cacao
Thecc1EG021491 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33338382-33340381 Theobroma cacao
Thecc1EG021491 5.0kb upstream 5.0kb upstream 7015 true scaffold_4: 33340382-33347396 Theobroma cacao
Thecc1EG021491 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33342397-33347396 Theobroma cacao
Thecc1EG021491 5.0kb downstream 5.0kb downstream 7015 true scaffold_4: 33335382-33342396 Theobroma cacao
Thecc1EG021491 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33335382-33340381 Theobroma cacao
Thecc1EG021491 10.0kb upstream 10.0kb upstream 12015 true scaffold_4: 33340382-33352396 Theobroma cacao
Thecc1EG021491 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33342397-33352396 Theobroma cacao
Thecc1EG021491 10.0kb downstream 10.0kb downstream 12015 true scaffold_4: 33330382-33342396 Theobroma cacao
Thecc1EG021491 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33330382-33340381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028901 5273 Angiosperm View MSA
123827991 5264 Brassicales-Malvales View MSA
124343269 5266 SBM View MSA
124245117 5268 Malvidae View MSA
124072878 5270 Rosid View MSA
123738912 5271 Pentapetalae View MSA
122787489 5272 Eudicot View MSA
121349839 5274 Embryophyte View MSA
123427981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain