Gene : Thecc1EG021440 T. cacao v1.1

Defline:  (1 of 1) PTHR23227 - BUCENTAUR RELATED Genomic Order:  3078
Name:  ? Thecc1EG021440 Secondary Identifier:  ? PAC:27451976

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021440 0.5kb upstream 0.5kb upstream 3361 true scaffold_4: 33077172-33080532 Theobroma cacao
Thecc1EG021440 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33077172-33077671 Theobroma cacao
Thecc1EG021440 0.5kb downstream 0.5kb downstream 3361 true scaffold_4: 33077672-33081032 Theobroma cacao
Thecc1EG021440 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33080533-33081032 Theobroma cacao
Thecc1EG021440 1.0kb upstream 1.0kb upstream 3861 true scaffold_4: 33076672-33080532 Theobroma cacao
Thecc1EG021440 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33076672-33077671 Theobroma cacao
Thecc1EG021440 1.0kb downstream 1.0kb downstream 3861 true scaffold_4: 33077672-33081532 Theobroma cacao
Thecc1EG021440 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33080533-33081532 Theobroma cacao
Thecc1EG021440 2.0kb upstream 2.0kb upstream 4861 true scaffold_4: 33075672-33080532 Theobroma cacao
Thecc1EG021440 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33075672-33077671 Theobroma cacao
Thecc1EG021440 2.0kb downstream 2.0kb downstream 4861 true scaffold_4: 33077672-33082532 Theobroma cacao
Thecc1EG021440 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33080533-33082532 Theobroma cacao
Thecc1EG021440 5.0kb upstream 5.0kb upstream 7861 true scaffold_4: 33072672-33080532 Theobroma cacao
Thecc1EG021440 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33072672-33077671 Theobroma cacao
Thecc1EG021440 5.0kb downstream 5.0kb downstream 7861 true scaffold_4: 33077672-33085532 Theobroma cacao
Thecc1EG021440 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33080533-33085532 Theobroma cacao
Thecc1EG021440 10.0kb upstream 10.0kb upstream 12861 true scaffold_4: 33067672-33080532 Theobroma cacao
Thecc1EG021440 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33067672-33077671 Theobroma cacao
Thecc1EG021440 10.0kb downstream 10.0kb downstream 12861 true scaffold_4: 33077672-33090532 Theobroma cacao
Thecc1EG021440 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33080533-33090532 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836463 5264 Brassicales-Malvales View MSA
124338763 5266 SBM View MSA
124237930 5268 Malvidae View MSA
124061024 5270 Rosid View MSA
123752119 5271 Pentapetalae View MSA
122786900 5272 Eudicot View MSA
122044103 5273 Angiosperm View MSA
121343963 5274 Embryophyte View MSA
123425140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain