Gene : Thecc1EG021434 T. cacao v1.1
Defline:  (1 of 1) K10589 - ubiquitin-protein ligase E3 C (UBE3C) Genomic Order:  3072
Name:  ? Thecc1EG021434 Secondary Identifier:  ? PAC:27455243
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021434 0.5kb upstream 0.5kb upstream 13723 true scaffold_4: 33045015-33058737 Theobroma cacao
Thecc1EG021434 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33045015-33045514 Theobroma cacao
Thecc1EG021434 0.5kb downstream 0.5kb downstream 13723 true scaffold_4: 33045515-33059237 Theobroma cacao
Thecc1EG021434 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33058738-33059237 Theobroma cacao
Thecc1EG021434 1.0kb upstream 1.0kb upstream 14223 true scaffold_4: 33044515-33058737 Theobroma cacao
Thecc1EG021434 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33044515-33045514 Theobroma cacao
Thecc1EG021434 1.0kb downstream 1.0kb downstream 14223 true scaffold_4: 33045515-33059737 Theobroma cacao
Thecc1EG021434 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33058738-33059737 Theobroma cacao
Thecc1EG021434 2.0kb upstream 2.0kb upstream 15223 true scaffold_4: 33043515-33058737 Theobroma cacao
Thecc1EG021434 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33043515-33045514 Theobroma cacao
Thecc1EG021434 2.0kb downstream 2.0kb downstream 15223 true scaffold_4: 33045515-33060737 Theobroma cacao
Thecc1EG021434 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33058738-33060737 Theobroma cacao
Thecc1EG021434 5.0kb upstream 5.0kb upstream 18223 true scaffold_4: 33040515-33058737 Theobroma cacao
Thecc1EG021434 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33040515-33045514 Theobroma cacao
Thecc1EG021434 5.0kb downstream 5.0kb downstream 18223 true scaffold_4: 33045515-33063737 Theobroma cacao
Thecc1EG021434 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33058738-33063737 Theobroma cacao
Thecc1EG021434 10.0kb upstream 10.0kb upstream 23223 true scaffold_4: 33035515-33058737 Theobroma cacao
Thecc1EG021434 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33035515-33045514 Theobroma cacao
Thecc1EG021434 10.0kb downstream 10.0kb downstream 23223 true scaffold_4: 33045515-33068737 Theobroma cacao
Thecc1EG021434 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33058738-33068737 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827470 5264 Brassicales-Malvales View MSA
124351218 5266 SBM View MSA
124242854 5268 Malvidae View MSA
124063556 5270 Rosid View MSA
123740343 5271 Pentapetalae View MSA
122788318 5272 Eudicot View MSA
122046917 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121344767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain