Gene : Thecc1EG021641 T. cacao v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF111 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  111
Name:  ? Thecc1EG021641 Secondary Identifier:  ? PAC:27423942
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021641 0.5kb upstream 0.5kb upstream 1321 true scaffold_5: 529169-530489 Theobroma cacao
Thecc1EG021641 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 529169-529668 Theobroma cacao
Thecc1EG021641 0.5kb downstream 0.5kb downstream 1321 true scaffold_5: 529669-530989 Theobroma cacao
Thecc1EG021641 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 530490-530989 Theobroma cacao
Thecc1EG021641 1.0kb upstream 1.0kb upstream 1821 true scaffold_5: 528669-530489 Theobroma cacao
Thecc1EG021641 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 528669-529668 Theobroma cacao
Thecc1EG021641 1.0kb downstream 1.0kb downstream 1821 true scaffold_5: 529669-531489 Theobroma cacao
Thecc1EG021641 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 530490-531489 Theobroma cacao
Thecc1EG021641 2.0kb upstream 2.0kb upstream 2821 true scaffold_5: 527669-530489 Theobroma cacao
Thecc1EG021641 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 527669-529668 Theobroma cacao
Thecc1EG021641 2.0kb downstream 2.0kb downstream 2821 true scaffold_5: 529669-532489 Theobroma cacao
Thecc1EG021641 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 530490-532489 Theobroma cacao
Thecc1EG021641 5.0kb upstream 5.0kb upstream 5821 true scaffold_5: 524669-530489 Theobroma cacao
Thecc1EG021641 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 524669-529668 Theobroma cacao
Thecc1EG021641 5.0kb downstream 5.0kb downstream 5821 true scaffold_5: 529669-535489 Theobroma cacao
Thecc1EG021641 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 530490-535489 Theobroma cacao
Thecc1EG021641 10.0kb upstream 10.0kb upstream 10821 true scaffold_5: 519669-530489 Theobroma cacao
Thecc1EG021641 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 519669-529668 Theobroma cacao
Thecc1EG021641 10.0kb downstream 10.0kb downstream 10821 true scaffold_5: 529669-540489 Theobroma cacao
Thecc1EG021641 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 530490-540489 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829456 5264 Brassicales-Malvales View MSA
124347887 5266 SBM View MSA
124248632 5268 Malvidae View MSA
124062261 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain