Gene : Thecc1EG021616 T. cacao v1.1
Defline:  (1 of 5) K08059 - interferon, gamma-inducible protein 30 (IFI30, GILT) Genomic Order:  92
Name:  ? Thecc1EG021616 Secondary Identifier:  ? PAC:27421245
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021616 0.5kb upstream 0.5kb upstream 2445 true scaffold_5: 444727-447171 Theobroma cacao
Thecc1EG021616 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 444727-445226 Theobroma cacao
Thecc1EG021616 0.5kb downstream 0.5kb downstream 2445 true scaffold_5: 445227-447671 Theobroma cacao
Thecc1EG021616 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 447172-447671 Theobroma cacao
Thecc1EG021616 1.0kb upstream 1.0kb upstream 2945 true scaffold_5: 444227-447171 Theobroma cacao
Thecc1EG021616 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 444227-445226 Theobroma cacao
Thecc1EG021616 1.0kb downstream 1.0kb downstream 2945 true scaffold_5: 445227-448171 Theobroma cacao
Thecc1EG021616 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 447172-448171 Theobroma cacao
Thecc1EG021616 2.0kb upstream 2.0kb upstream 3945 true scaffold_5: 443227-447171 Theobroma cacao
Thecc1EG021616 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 443227-445226 Theobroma cacao
Thecc1EG021616 2.0kb downstream 2.0kb downstream 3945 true scaffold_5: 445227-449171 Theobroma cacao
Thecc1EG021616 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 447172-449171 Theobroma cacao
Thecc1EG021616 5.0kb upstream 5.0kb upstream 6945 true scaffold_5: 440227-447171 Theobroma cacao
Thecc1EG021616 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 440227-445226 Theobroma cacao
Thecc1EG021616 5.0kb downstream 5.0kb downstream 6945 true scaffold_5: 445227-452171 Theobroma cacao
Thecc1EG021616 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 447172-452171 Theobroma cacao
Thecc1EG021616 10.0kb upstream 10.0kb upstream 11945 true scaffold_5: 435227-447171 Theobroma cacao
Thecc1EG021616 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 435227-445226 Theobroma cacao
Thecc1EG021616 10.0kb downstream 10.0kb downstream 11945 true scaffold_5: 445227-457171 Theobroma cacao
Thecc1EG021616 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 447172-457171 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823975 5264 Brassicales-Malvales View MSA
124320006 5266 SBM View MSA
124248311 5268 Malvidae View MSA
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain