Gene : Thecc1EG021613 T. cacao v1.1
Defline:  (1 of 1) PTHR13234//PTHR13234:SF20 - GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT // SUBFAMILY NOT NAMED Genomic Order:  89
Name:  ? Thecc1EG021613 Secondary Identifier:  ? PAC:27422787
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021613 0.5kb upstream 0.5kb upstream 3021 true scaffold_5: 436857-439877 Theobroma cacao
Thecc1EG021613 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 436857-437356 Theobroma cacao
Thecc1EG021613 0.5kb downstream 0.5kb downstream 3021 true scaffold_5: 437357-440377 Theobroma cacao
Thecc1EG021613 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 439878-440377 Theobroma cacao
Thecc1EG021613 1.0kb upstream 1.0kb upstream 3521 true scaffold_5: 436357-439877 Theobroma cacao
Thecc1EG021613 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 436357-437356 Theobroma cacao
Thecc1EG021613 1.0kb downstream 1.0kb downstream 3521 true scaffold_5: 437357-440877 Theobroma cacao
Thecc1EG021613 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 439878-440877 Theobroma cacao
Thecc1EG021613 2.0kb upstream 2.0kb upstream 4521 true scaffold_5: 435357-439877 Theobroma cacao
Thecc1EG021613 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 435357-437356 Theobroma cacao
Thecc1EG021613 2.0kb downstream 2.0kb downstream 4521 true scaffold_5: 437357-441877 Theobroma cacao
Thecc1EG021613 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 439878-441877 Theobroma cacao
Thecc1EG021613 5.0kb upstream 5.0kb upstream 7521 true scaffold_5: 432357-439877 Theobroma cacao
Thecc1EG021613 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 432357-437356 Theobroma cacao
Thecc1EG021613 5.0kb downstream 5.0kb downstream 7521 true scaffold_5: 437357-444877 Theobroma cacao
Thecc1EG021613 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 439878-444877 Theobroma cacao
Thecc1EG021613 10.0kb upstream 10.0kb upstream 12521 true scaffold_5: 427357-439877 Theobroma cacao
Thecc1EG021613 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 427357-437356 Theobroma cacao
Thecc1EG021613 10.0kb downstream 10.0kb downstream 12521 true scaffold_5: 437357-449877 Theobroma cacao
Thecc1EG021613 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 439878-449877 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836817 5264 Brassicales-Malvales View MSA
124346820 5266 SBM View MSA
124248311 5268 Malvidae View MSA
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain