Gene : Thecc1EG021604 T. cacao v1.1

Defline:  (1 of 1) PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 Genomic Order:  80
Name:  ? Thecc1EG021604 Secondary Identifier:  ? PAC:27420839

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021604 0.5kb upstream 0.5kb upstream 2748 true scaffold_5: 406465-409212 Theobroma cacao
Thecc1EG021604 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 408713-409212 Theobroma cacao
Thecc1EG021604 0.5kb downstream 0.5kb downstream 2748 true scaffold_5: 405965-408712 Theobroma cacao
Thecc1EG021604 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 405965-406464 Theobroma cacao
Thecc1EG021604 1.0kb upstream 1.0kb upstream 3248 true scaffold_5: 406465-409712 Theobroma cacao
Thecc1EG021604 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 408713-409712 Theobroma cacao
Thecc1EG021604 1.0kb downstream 1.0kb downstream 3248 true scaffold_5: 405465-408712 Theobroma cacao
Thecc1EG021604 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 405465-406464 Theobroma cacao
Thecc1EG021604 2.0kb upstream 2.0kb upstream 4248 true scaffold_5: 406465-410712 Theobroma cacao
Thecc1EG021604 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 408713-410712 Theobroma cacao
Thecc1EG021604 2.0kb downstream 2.0kb downstream 4248 true scaffold_5: 404465-408712 Theobroma cacao
Thecc1EG021604 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 404465-406464 Theobroma cacao
Thecc1EG021604 5.0kb upstream 5.0kb upstream 7248 true scaffold_5: 406465-413712 Theobroma cacao
Thecc1EG021604 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 408713-413712 Theobroma cacao
Thecc1EG021604 5.0kb downstream 5.0kb downstream 7248 true scaffold_5: 401465-408712 Theobroma cacao
Thecc1EG021604 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 401465-406464 Theobroma cacao
Thecc1EG021604 10.0kb upstream 10.0kb upstream 12248 true scaffold_5: 406465-418712 Theobroma cacao
Thecc1EG021604 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 408713-418712 Theobroma cacao
Thecc1EG021604 10.0kb downstream 10.0kb downstream 12248 true scaffold_5: 396465-408712 Theobroma cacao
Thecc1EG021604 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 396465-406464 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838157 5264 Brassicales-Malvales View MSA
124342906 5266 SBM View MSA
124243220 5268 Malvidae View MSA
124069147 5270 Rosid View MSA
123738622 5271 Pentapetalae View MSA
122795590 5272 Eudicot View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain