Gene : Thecc1EG021541 T. cacao v1.1
Defline:  (1 of 1) PTHR22792//PTHR22792:SF52 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6B Genomic Order:  20
Name:  ? Thecc1EG021541 Secondary Identifier:  ? PAC:27424280
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021541 0.5kb upstream 0.5kb upstream 5030 true scaffold_5: 121896-126925 Theobroma cacao
Thecc1EG021541 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 121896-122395 Theobroma cacao
Thecc1EG021541 0.5kb downstream 0.5kb downstream 5030 true scaffold_5: 122396-127425 Theobroma cacao
Thecc1EG021541 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 126926-127425 Theobroma cacao
Thecc1EG021541 1.0kb upstream 1.0kb upstream 5530 true scaffold_5: 121396-126925 Theobroma cacao
Thecc1EG021541 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 121396-122395 Theobroma cacao
Thecc1EG021541 1.0kb downstream 1.0kb downstream 5530 true scaffold_5: 122396-127925 Theobroma cacao
Thecc1EG021541 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 126926-127925 Theobroma cacao
Thecc1EG021541 2.0kb upstream 2.0kb upstream 6530 true scaffold_5: 120396-126925 Theobroma cacao
Thecc1EG021541 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 120396-122395 Theobroma cacao
Thecc1EG021541 2.0kb downstream 2.0kb downstream 6530 true scaffold_5: 122396-128925 Theobroma cacao
Thecc1EG021541 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 126926-128925 Theobroma cacao
Thecc1EG021541 5.0kb upstream 5.0kb upstream 9530 true scaffold_5: 117396-126925 Theobroma cacao
Thecc1EG021541 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 117396-122395 Theobroma cacao
Thecc1EG021541 5.0kb downstream 5.0kb downstream 9530 true scaffold_5: 122396-131925 Theobroma cacao
Thecc1EG021541 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 126926-131925 Theobroma cacao
Thecc1EG021541 10.0kb upstream 10.0kb upstream 14530 true scaffold_5: 112396-126925 Theobroma cacao
Thecc1EG021541 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 112396-122395 Theobroma cacao
Thecc1EG021541 10.0kb downstream 10.0kb downstream 14530 true scaffold_5: 122396-136925 Theobroma cacao
Thecc1EG021541 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 126926-136925 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833798 5264 Brassicales-Malvales View MSA
124348665 5266 SBM View MSA
124245210 5268 Malvidae View MSA
124073936 5270 Rosid View MSA
123744284 5271 Pentapetalae View MSA
122790327 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain