Gene : Thecc1EG021543 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  22
Name:  ? Thecc1EG021543 Secondary Identifier:  ? PAC:27424587
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6730 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021543 0.5kb upstream 0.5kb upstream 2941 true scaffold_5: 130336-133276 Theobroma cacao
Thecc1EG021543 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 130336-130835 Theobroma cacao
Thecc1EG021543 0.5kb downstream 0.5kb downstream 2941 true scaffold_5: 130836-133776 Theobroma cacao
Thecc1EG021543 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 133277-133776 Theobroma cacao
Thecc1EG021543 1.0kb upstream 1.0kb upstream 3441 true scaffold_5: 129836-133276 Theobroma cacao
Thecc1EG021543 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 129836-130835 Theobroma cacao
Thecc1EG021543 1.0kb downstream 1.0kb downstream 3441 true scaffold_5: 130836-134276 Theobroma cacao
Thecc1EG021543 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 133277-134276 Theobroma cacao
Thecc1EG021543 2.0kb upstream 2.0kb upstream 4441 true scaffold_5: 128836-133276 Theobroma cacao
Thecc1EG021543 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 128836-130835 Theobroma cacao
Thecc1EG021543 2.0kb downstream 2.0kb downstream 4441 true scaffold_5: 130836-135276 Theobroma cacao
Thecc1EG021543 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 133277-135276 Theobroma cacao
Thecc1EG021543 5.0kb upstream 5.0kb upstream 7441 true scaffold_5: 125836-133276 Theobroma cacao
Thecc1EG021543 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 125836-130835 Theobroma cacao
Thecc1EG021543 5.0kb downstream 5.0kb downstream 7441 true scaffold_5: 130836-138276 Theobroma cacao
Thecc1EG021543 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 133277-138276 Theobroma cacao
Thecc1EG021543 10.0kb upstream 10.0kb upstream 12441 true scaffold_5: 120836-133276 Theobroma cacao
Thecc1EG021543 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 120836-130835 Theobroma cacao
Thecc1EG021543 10.0kb downstream 10.0kb downstream 12441 true scaffold_5: 130836-143276 Theobroma cacao
Thecc1EG021543 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 133277-143276 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
123830657 5264 Brassicales-Malvales View MSA
124340535 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain