Gene : Thecc1EG021528 T. cacao v1.1
Defline:  (1 of 50) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  10
Name:  ? Thecc1EG021528 Secondary Identifier:  ? PAC:27421406
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021528 0.5kb upstream 0.5kb upstream 3714 true scaffold_5: 77378-81091 Theobroma cacao
Thecc1EG021528 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 80592-81091 Theobroma cacao
Thecc1EG021528 0.5kb downstream 0.5kb downstream 3714 true scaffold_5: 76878-80591 Theobroma cacao
Thecc1EG021528 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 76878-77377 Theobroma cacao
Thecc1EG021528 1.0kb upstream 1.0kb upstream 4214 true scaffold_5: 77378-81591 Theobroma cacao
Thecc1EG021528 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 80592-81591 Theobroma cacao
Thecc1EG021528 1.0kb downstream 1.0kb downstream 4214 true scaffold_5: 76378-80591 Theobroma cacao
Thecc1EG021528 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 76378-77377 Theobroma cacao
Thecc1EG021528 2.0kb upstream 2.0kb upstream 5214 true scaffold_5: 77378-82591 Theobroma cacao
Thecc1EG021528 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 80592-82591 Theobroma cacao
Thecc1EG021528 2.0kb downstream 2.0kb downstream 5214 true scaffold_5: 75378-80591 Theobroma cacao
Thecc1EG021528 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 75378-77377 Theobroma cacao
Thecc1EG021528 5.0kb upstream 5.0kb upstream 8214 true scaffold_5: 77378-85591 Theobroma cacao
Thecc1EG021528 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 80592-85591 Theobroma cacao
Thecc1EG021528 5.0kb downstream 5.0kb downstream 8214 true scaffold_5: 72378-80591 Theobroma cacao
Thecc1EG021528 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 72378-77377 Theobroma cacao
Thecc1EG021528 10.0kb upstream 10.0kb upstream 13214 true scaffold_5: 77378-90591 Theobroma cacao
Thecc1EG021528 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 80592-90591 Theobroma cacao
Thecc1EG021528 10.0kb downstream 10.0kb downstream 13214 true scaffold_5: 67378-80591 Theobroma cacao
Thecc1EG021528 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 67378-77377 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840240 5264 Brassicales-Malvales View MSA
124345143 5266 SBM View MSA
124243154 5268 Malvidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain