Gene : Thecc1EG021524 T. cacao v1.1
Defline:  (1 of 18) K08472 - mlo protein (MLO) Genomic Order:  6
Name:  ? Thecc1EG021524 Secondary Identifier:  ? PAC:27422115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021524 0.5kb upstream 0.5kb upstream 5128 true scaffold_5: 54336-59463 Theobroma cacao
Thecc1EG021524 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 54336-54835 Theobroma cacao
Thecc1EG021524 0.5kb downstream 0.5kb downstream 5128 true scaffold_5: 54836-59963 Theobroma cacao
Thecc1EG021524 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 59464-59963 Theobroma cacao
Thecc1EG021524 1.0kb upstream 1.0kb upstream 5628 true scaffold_5: 53836-59463 Theobroma cacao
Thecc1EG021524 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 53836-54835 Theobroma cacao
Thecc1EG021524 1.0kb downstream 1.0kb downstream 5628 true scaffold_5: 54836-60463 Theobroma cacao
Thecc1EG021524 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 59464-60463 Theobroma cacao
Thecc1EG021524 2.0kb upstream 2.0kb upstream 6628 true scaffold_5: 52836-59463 Theobroma cacao
Thecc1EG021524 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 52836-54835 Theobroma cacao
Thecc1EG021524 2.0kb downstream 2.0kb downstream 6628 true scaffold_5: 54836-61463 Theobroma cacao
Thecc1EG021524 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 59464-61463 Theobroma cacao
Thecc1EG021524 5.0kb upstream 5.0kb upstream 9628 true scaffold_5: 49836-59463 Theobroma cacao
Thecc1EG021524 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 49836-54835 Theobroma cacao
Thecc1EG021524 5.0kb downstream 5.0kb downstream 9628 true scaffold_5: 54836-64463 Theobroma cacao
Thecc1EG021524 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 59464-64463 Theobroma cacao
Thecc1EG021524 10.0kb upstream 10.0kb upstream 14628 true scaffold_5: 44836-59463 Theobroma cacao
Thecc1EG021524 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 44836-54835 Theobroma cacao
Thecc1EG021524 10.0kb downstream 10.0kb downstream 14628 true scaffold_5: 54836-69463 Theobroma cacao
Thecc1EG021524 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 59464-69463 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820431 5264 Brassicales-Malvales Singleton cluster - no MSA
124351151 5266 SBM View MSA
124245856 5268 Malvidae View MSA
124071997 5270 Rosid View MSA
123749383 5271 Pentapetalae View MSA
122792924 5272 Eudicot View MSA
122050159 5273 Angiosperm View MSA
121350481 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain