Gene : Thecc1EG047044 T. cacao v1.1
Defline:  (1 of 1) PTHR34543//PTHR34543:SF1 - FAMILY NOT NAMED // ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN Genomic Order:  1401
Name:  ? Thecc1EG047044 Secondary Identifier:  ? PAC:27455606
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6809 Theobroma cacao pathologic  
Tcacao PWY-695 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047044 0.5kb upstream 0.5kb upstream 4213 true scaffold_4: 22469086-22473298 Theobroma cacao
Thecc1EG047044 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22472799-22473298 Theobroma cacao
Thecc1EG047044 0.5kb downstream 0.5kb downstream 4213 true scaffold_4: 22468586-22472798 Theobroma cacao
Thecc1EG047044 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22468586-22469085 Theobroma cacao
Thecc1EG047044 1.0kb upstream 1.0kb upstream 4713 true scaffold_4: 22469086-22473798 Theobroma cacao
Thecc1EG047044 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22472799-22473798 Theobroma cacao
Thecc1EG047044 1.0kb downstream 1.0kb downstream 4713 true scaffold_4: 22468086-22472798 Theobroma cacao
Thecc1EG047044 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22468086-22469085 Theobroma cacao
Thecc1EG047044 2.0kb upstream 2.0kb upstream 5713 true scaffold_4: 22469086-22474798 Theobroma cacao
Thecc1EG047044 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22472799-22474798 Theobroma cacao
Thecc1EG047044 2.0kb downstream 2.0kb downstream 5713 true scaffold_4: 22467086-22472798 Theobroma cacao
Thecc1EG047044 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22467086-22469085 Theobroma cacao
Thecc1EG047044 5.0kb upstream 5.0kb upstream 8713 true scaffold_4: 22469086-22477798 Theobroma cacao
Thecc1EG047044 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22472799-22477798 Theobroma cacao
Thecc1EG047044 5.0kb downstream 5.0kb downstream 8713 true scaffold_4: 22464086-22472798 Theobroma cacao
Thecc1EG047044 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22464086-22469085 Theobroma cacao
Thecc1EG047044 10.0kb upstream 10.0kb upstream 13713 true scaffold_4: 22469086-22482798 Theobroma cacao
Thecc1EG047044 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22472799-22482798 Theobroma cacao
Thecc1EG047044 10.0kb downstream 10.0kb downstream 13713 true scaffold_4: 22459086-22472798 Theobroma cacao
Thecc1EG047044 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22459086-22469085 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832925 5264 Brassicales-Malvales View MSA
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain