Gene : Thecc1EG047038 T. cacao v1.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF54 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  867
Name:  ? Thecc1EG047038 Secondary Identifier:  ? PAC:27454945
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047038 0.5kb upstream 0.5kb upstream 3227 true scaffold_4: 16213945-16217171 Theobroma cacao
Thecc1EG047038 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 16216672-16217171 Theobroma cacao
Thecc1EG047038 0.5kb downstream 0.5kb downstream 3227 true scaffold_4: 16213445-16216671 Theobroma cacao
Thecc1EG047038 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 16213445-16213944 Theobroma cacao
Thecc1EG047038 1.0kb upstream 1.0kb upstream 3727 true scaffold_4: 16213945-16217671 Theobroma cacao
Thecc1EG047038 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 16216672-16217671 Theobroma cacao
Thecc1EG047038 1.0kb downstream 1.0kb downstream 3727 true scaffold_4: 16212945-16216671 Theobroma cacao
Thecc1EG047038 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 16212945-16213944 Theobroma cacao
Thecc1EG047038 2.0kb upstream 2.0kb upstream 4727 true scaffold_4: 16213945-16218671 Theobroma cacao
Thecc1EG047038 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 16216672-16218671 Theobroma cacao
Thecc1EG047038 2.0kb downstream 2.0kb downstream 4727 true scaffold_4: 16211945-16216671 Theobroma cacao
Thecc1EG047038 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 16211945-16213944 Theobroma cacao
Thecc1EG047038 5.0kb upstream 5.0kb upstream 7727 true scaffold_4: 16213945-16221671 Theobroma cacao
Thecc1EG047038 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 16216672-16221671 Theobroma cacao
Thecc1EG047038 5.0kb downstream 5.0kb downstream 7727 true scaffold_4: 16208945-16216671 Theobroma cacao
Thecc1EG047038 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 16208945-16213944 Theobroma cacao
Thecc1EG047038 10.0kb upstream 10.0kb upstream 12727 true scaffold_4: 16213945-16226671 Theobroma cacao
Thecc1EG047038 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 16216672-16226671 Theobroma cacao
Thecc1EG047038 10.0kb downstream 10.0kb downstream 12727 true scaffold_4: 16203945-16216671 Theobroma cacao
Thecc1EG047038 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 16203945-16213944 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819536 5264 Brassicales-Malvales Singleton cluster - no MSA
124315786 5266 SBM Singleton cluster - no MSA
124248645 5268 Malvidae View MSA
124038195 5270 Rosid View MSA
123647898 5271 Pentapetalae View MSA
122681840 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain