Gene : Thecc1EG046106 T. cacao v1.1
Defline:  (1 of 2) PF12796//PF13961//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (DUF4219) (DUF4219) // Domain of unknown function (PGG) Genomic Order:  1
Name:  ? Thecc1EG046106 Secondary Identifier:  ? PAC:27441250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046106 0.5kb upstream 0.5kb upstream 29134 true scaffold_43: 9736-38869 Theobroma cacao
Thecc1EG046106 0.5kb upstream 0.5kb upstream 500 false scaffold_43: 9736-10235 Theobroma cacao
Thecc1EG046106 0.5kb downstream 0.5kb downstream 29134 true scaffold_43: 10236-39369 Theobroma cacao
Thecc1EG046106 0.5kb downstream 0.5kb downstream 500 false scaffold_43: 38870-39369 Theobroma cacao
Thecc1EG046106 1.0kb upstream 1.0kb upstream 29634 true scaffold_43: 9236-38869 Theobroma cacao
Thecc1EG046106 1.0kb upstream 1.0kb upstream 1000 false scaffold_43: 9236-10235 Theobroma cacao
Thecc1EG046106 1.0kb downstream 1.0kb downstream 29634 true scaffold_43: 10236-39869 Theobroma cacao
Thecc1EG046106 1.0kb downstream 1.0kb downstream 1000 false scaffold_43: 38870-39869 Theobroma cacao
Thecc1EG046106 2.0kb upstream 2.0kb upstream 30634 true scaffold_43: 8236-38869 Theobroma cacao
Thecc1EG046106 2.0kb upstream 2.0kb upstream 2000 false scaffold_43: 8236-10235 Theobroma cacao
Thecc1EG046106 2.0kb downstream 2.0kb downstream 30634 true scaffold_43: 10236-40869 Theobroma cacao
Thecc1EG046106 2.0kb downstream 2.0kb downstream 2000 false scaffold_43: 38870-40869 Theobroma cacao
Thecc1EG046106 5.0kb upstream 5.0kb upstream 33634 true scaffold_43: 5236-38869 Theobroma cacao
Thecc1EG046106 5.0kb upstream 5.0kb upstream 5000 false scaffold_43: 5236-10235 Theobroma cacao
Thecc1EG046106 5.0kb downstream 5.0kb downstream 33634 true scaffold_43: 10236-43869 Theobroma cacao
Thecc1EG046106 5.0kb downstream 5.0kb downstream 5000 false scaffold_43: 38870-43869 Theobroma cacao
Thecc1EG046106 10.0kb upstream 10.0kb upstream 38634 true scaffold_43: 236-38869 Theobroma cacao
Thecc1EG046106 10.0kb upstream 10.0kb upstream 10000 false scaffold_43: 236-10235 Theobroma cacao
Thecc1EG046106 10.0kb downstream 10.0kb downstream 38634 true scaffold_43: 10236-48869 Theobroma cacao
Thecc1EG046106 10.0kb downstream 10.0kb downstream 10000 false scaffold_43: 38870-48869 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823860 5264 Brassicales-Malvales View MSA
124319914 5266 SBM View MSA
124254356 5268 Malvidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain