Gene : Thecc1EG021771 T. cacao v1.1

Defline:  (1 of 1) K09591 - steroid 5-alpha-reductase (DET2) Genomic Order:  225
Name:  ? Thecc1EG021771 Secondary Identifier:  ? PAC:27422991

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021771 0.5kb upstream 0.5kb upstream 1825 true scaffold_5: 1138297-1140121 Theobroma cacao
Thecc1EG021771 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1138297-1138796 Theobroma cacao
Thecc1EG021771 0.5kb downstream 0.5kb downstream 1825 true scaffold_5: 1138797-1140621 Theobroma cacao
Thecc1EG021771 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1140122-1140621 Theobroma cacao
Thecc1EG021771 1.0kb upstream 1.0kb upstream 2325 true scaffold_5: 1137797-1140121 Theobroma cacao
Thecc1EG021771 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1137797-1138796 Theobroma cacao
Thecc1EG021771 1.0kb downstream 1.0kb downstream 2325 true scaffold_5: 1138797-1141121 Theobroma cacao
Thecc1EG021771 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1140122-1141121 Theobroma cacao
Thecc1EG021771 2.0kb upstream 2.0kb upstream 3325 true scaffold_5: 1136797-1140121 Theobroma cacao
Thecc1EG021771 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1136797-1138796 Theobroma cacao
Thecc1EG021771 2.0kb downstream 2.0kb downstream 3325 true scaffold_5: 1138797-1142121 Theobroma cacao
Thecc1EG021771 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1140122-1142121 Theobroma cacao
Thecc1EG021771 5.0kb upstream 5.0kb upstream 6325 true scaffold_5: 1133797-1140121 Theobroma cacao
Thecc1EG021771 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1133797-1138796 Theobroma cacao
Thecc1EG021771 5.0kb downstream 5.0kb downstream 6325 true scaffold_5: 1138797-1145121 Theobroma cacao
Thecc1EG021771 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1140122-1145121 Theobroma cacao
Thecc1EG021771 10.0kb upstream 10.0kb upstream 11325 true scaffold_5: 1128797-1140121 Theobroma cacao
Thecc1EG021771 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1128797-1138796 Theobroma cacao
Thecc1EG021771 10.0kb downstream 10.0kb downstream 11325 true scaffold_5: 1138797-1150121 Theobroma cacao
Thecc1EG021771 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1140122-1150121 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827378 5264 Brassicales-Malvales View MSA
124337354 5266 SBM View MSA
124239022 5268 Malvidae View MSA
124064242 5270 Rosid View MSA
123736614 5271 Pentapetalae View MSA
122785664 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain