Gene : Thecc1EG021744 T. cacao v1.1
Defline:  (1 of 1) 2.3.1.133//2.3.1.99 - Shikimate O-hydroxycinnamoyltransferase // Quinate O-hydroxycinnamoyltransferase / Hydroxycinnamoyl coenzyme A-quinate transferase Genomic Order:  204
Name:  ? Thecc1EG021744 Secondary Identifier:  ? PAC:27422914
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  
Tcacao PWY-6040 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021744 0.5kb upstream 0.5kb upstream 2787 true scaffold_5: 1032034-1034820 Theobroma cacao
Thecc1EG021744 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1034321-1034820 Theobroma cacao
Thecc1EG021744 0.5kb downstream 0.5kb downstream 2787 true scaffold_5: 1031534-1034320 Theobroma cacao
Thecc1EG021744 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1031534-1032033 Theobroma cacao
Thecc1EG021744 1.0kb upstream 1.0kb upstream 3287 true scaffold_5: 1032034-1035320 Theobroma cacao
Thecc1EG021744 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1034321-1035320 Theobroma cacao
Thecc1EG021744 1.0kb downstream 1.0kb downstream 3287 true scaffold_5: 1031034-1034320 Theobroma cacao
Thecc1EG021744 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1031034-1032033 Theobroma cacao
Thecc1EG021744 2.0kb upstream 2.0kb upstream 4287 true scaffold_5: 1032034-1036320 Theobroma cacao
Thecc1EG021744 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1034321-1036320 Theobroma cacao
Thecc1EG021744 2.0kb downstream 2.0kb downstream 4287 true scaffold_5: 1030034-1034320 Theobroma cacao
Thecc1EG021744 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1030034-1032033 Theobroma cacao
Thecc1EG021744 5.0kb upstream 5.0kb upstream 7287 true scaffold_5: 1032034-1039320 Theobroma cacao
Thecc1EG021744 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1034321-1039320 Theobroma cacao
Thecc1EG021744 5.0kb downstream 5.0kb downstream 7287 true scaffold_5: 1027034-1034320 Theobroma cacao
Thecc1EG021744 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1027034-1032033 Theobroma cacao
Thecc1EG021744 10.0kb upstream 10.0kb upstream 12287 true scaffold_5: 1032034-1044320 Theobroma cacao
Thecc1EG021744 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1034321-1044320 Theobroma cacao
Thecc1EG021744 10.0kb downstream 10.0kb downstream 12287 true scaffold_5: 1022034-1034320 Theobroma cacao
Thecc1EG021744 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1022034-1032033 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830100 5264 Brassicales-Malvales View MSA
124345932 5266 SBM View MSA
124241469 5268 Malvidae View MSA
124064674 5270 Rosid View MSA
123740627 5271 Pentapetalae View MSA
122795284 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain