Gene : Thecc1EG021708 T. cacao v1.1
Defline:  (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Genomic Order:  172
Name:  ? Thecc1EG021708 Secondary Identifier:  ? PAC:27424740
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021708 0.5kb upstream 0.5kb upstream 1979 true scaffold_5: 884560-886538 Theobroma cacao
Thecc1EG021708 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 884560-885059 Theobroma cacao
Thecc1EG021708 0.5kb downstream 0.5kb downstream 1979 true scaffold_5: 885060-887038 Theobroma cacao
Thecc1EG021708 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 886539-887038 Theobroma cacao
Thecc1EG021708 1.0kb upstream 1.0kb upstream 2479 true scaffold_5: 884060-886538 Theobroma cacao
Thecc1EG021708 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 884060-885059 Theobroma cacao
Thecc1EG021708 1.0kb downstream 1.0kb downstream 2479 true scaffold_5: 885060-887538 Theobroma cacao
Thecc1EG021708 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 886539-887538 Theobroma cacao
Thecc1EG021708 2.0kb upstream 2.0kb upstream 3479 true scaffold_5: 883060-886538 Theobroma cacao
Thecc1EG021708 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 883060-885059 Theobroma cacao
Thecc1EG021708 2.0kb downstream 2.0kb downstream 3479 true scaffold_5: 885060-888538 Theobroma cacao
Thecc1EG021708 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 886539-888538 Theobroma cacao
Thecc1EG021708 5.0kb upstream 5.0kb upstream 6479 true scaffold_5: 880060-886538 Theobroma cacao
Thecc1EG021708 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 880060-885059 Theobroma cacao
Thecc1EG021708 5.0kb downstream 5.0kb downstream 6479 true scaffold_5: 885060-891538 Theobroma cacao
Thecc1EG021708 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 886539-891538 Theobroma cacao
Thecc1EG021708 10.0kb upstream 10.0kb upstream 11479 true scaffold_5: 875060-886538 Theobroma cacao
Thecc1EG021708 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 875060-885059 Theobroma cacao
Thecc1EG021708 10.0kb downstream 10.0kb downstream 11479 true scaffold_5: 885060-896538 Theobroma cacao
Thecc1EG021708 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 886539-896538 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837744 5264 Brassicales-Malvales View MSA
124340992 5266 SBM View MSA
124245849 5268 Malvidae View MSA
124062500 5270 Rosid View MSA
123736418 5271 Pentapetalae View MSA
122792192 5272 Eudicot View MSA
122044716 5273 Angiosperm View MSA
121345249 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain