Gene : Thecc1EG021709 T. cacao v1.1

Defline:  (1 of 1) K09648 - mitochondrial inner membrane protease subunit 2 (IMP2) Genomic Order:  173
Name:  ? Thecc1EG021709 Secondary Identifier:  ? PAC:27423668

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021709 0.5kb upstream 0.5kb upstream 2802 true scaffold_5: 886936-889737 Theobroma cacao
Thecc1EG021709 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 886936-887435 Theobroma cacao
Thecc1EG021709 0.5kb downstream 0.5kb downstream 2802 true scaffold_5: 887436-890237 Theobroma cacao
Thecc1EG021709 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 889738-890237 Theobroma cacao
Thecc1EG021709 1.0kb upstream 1.0kb upstream 3302 true scaffold_5: 886436-889737 Theobroma cacao
Thecc1EG021709 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 886436-887435 Theobroma cacao
Thecc1EG021709 1.0kb downstream 1.0kb downstream 3302 true scaffold_5: 887436-890737 Theobroma cacao
Thecc1EG021709 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 889738-890737 Theobroma cacao
Thecc1EG021709 2.0kb upstream 2.0kb upstream 4302 true scaffold_5: 885436-889737 Theobroma cacao
Thecc1EG021709 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 885436-887435 Theobroma cacao
Thecc1EG021709 2.0kb downstream 2.0kb downstream 4302 true scaffold_5: 887436-891737 Theobroma cacao
Thecc1EG021709 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 889738-891737 Theobroma cacao
Thecc1EG021709 5.0kb upstream 5.0kb upstream 7302 true scaffold_5: 882436-889737 Theobroma cacao
Thecc1EG021709 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 882436-887435 Theobroma cacao
Thecc1EG021709 5.0kb downstream 5.0kb downstream 7302 true scaffold_5: 887436-894737 Theobroma cacao
Thecc1EG021709 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 889738-894737 Theobroma cacao
Thecc1EG021709 10.0kb upstream 10.0kb upstream 12302 true scaffold_5: 877436-889737 Theobroma cacao
Thecc1EG021709 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 877436-887435 Theobroma cacao
Thecc1EG021709 10.0kb downstream 10.0kb downstream 12302 true scaffold_5: 887436-899737 Theobroma cacao
Thecc1EG021709 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 889738-899737 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832602 5264 Brassicales-Malvales View MSA
124349202 5266 SBM View MSA
124250873 5268 Malvidae View MSA
124066686 5270 Rosid View MSA
123738438 5271 Pentapetalae View MSA
122786938 5272 Eudicot View MSA
122042561 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121346619 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain