Gene : Thecc1EG021712 T. cacao v1.1

Defline:  (1 of 4) PTHR12356 - NUCLEAR MOVEMENT PROTEIN NUDC Genomic Order:  176
Name:  ? Thecc1EG021712 Secondary Identifier:  ? PAC:27421530

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021712 0.5kb upstream 0.5kb upstream 1331 true scaffold_5: 900239-901569 Theobroma cacao
Thecc1EG021712 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 901070-901569 Theobroma cacao
Thecc1EG021712 0.5kb downstream 0.5kb downstream 1331 true scaffold_5: 899739-901069 Theobroma cacao
Thecc1EG021712 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 899739-900238 Theobroma cacao
Thecc1EG021712 1.0kb upstream 1.0kb upstream 1831 true scaffold_5: 900239-902069 Theobroma cacao
Thecc1EG021712 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 901070-902069 Theobroma cacao
Thecc1EG021712 1.0kb downstream 1.0kb downstream 1831 true scaffold_5: 899239-901069 Theobroma cacao
Thecc1EG021712 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 899239-900238 Theobroma cacao
Thecc1EG021712 2.0kb upstream 2.0kb upstream 2831 true scaffold_5: 900239-903069 Theobroma cacao
Thecc1EG021712 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 901070-903069 Theobroma cacao
Thecc1EG021712 2.0kb downstream 2.0kb downstream 2831 true scaffold_5: 898239-901069 Theobroma cacao
Thecc1EG021712 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 898239-900238 Theobroma cacao
Thecc1EG021712 5.0kb upstream 5.0kb upstream 5831 true scaffold_5: 900239-906069 Theobroma cacao
Thecc1EG021712 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 901070-906069 Theobroma cacao
Thecc1EG021712 5.0kb downstream 5.0kb downstream 5831 true scaffold_5: 895239-901069 Theobroma cacao
Thecc1EG021712 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 895239-900238 Theobroma cacao
Thecc1EG021712 10.0kb upstream 10.0kb upstream 10831 true scaffold_5: 900239-911069 Theobroma cacao
Thecc1EG021712 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 901070-911069 Theobroma cacao
Thecc1EG021712 10.0kb downstream 10.0kb downstream 10831 true scaffold_5: 890239-901069 Theobroma cacao
Thecc1EG021712 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 890239-900238 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827003 5264 Brassicales-Malvales View MSA
124321263 5266 SBM View MSA
124253061 5268 Malvidae View MSA
123952817 5270 Rosid View MSA
123752804 5271 Pentapetalae View MSA
122796165 5272 Eudicot View MSA
122044213 5273 Angiosperm View MSA
121350395 5274 Embryophyte View MSA
123424343 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain