Gene : Thecc1EG021677 T. cacao v1.1
Defline:  (1 of 1) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  144
Name:  ? Thecc1EG021677 Secondary Identifier:  ? PAC:27421551
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6013 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021677 0.5kb upstream 0.5kb upstream 4120 true scaffold_5: 731756-735875 Theobroma cacao
Thecc1EG021677 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 731756-732255 Theobroma cacao
Thecc1EG021677 0.5kb downstream 0.5kb downstream 4120 true scaffold_5: 732256-736375 Theobroma cacao
Thecc1EG021677 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 735876-736375 Theobroma cacao
Thecc1EG021677 1.0kb upstream 1.0kb upstream 4620 true scaffold_5: 731256-735875 Theobroma cacao
Thecc1EG021677 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 731256-732255 Theobroma cacao
Thecc1EG021677 1.0kb downstream 1.0kb downstream 4620 true scaffold_5: 732256-736875 Theobroma cacao
Thecc1EG021677 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 735876-736875 Theobroma cacao
Thecc1EG021677 2.0kb upstream 2.0kb upstream 5620 true scaffold_5: 730256-735875 Theobroma cacao
Thecc1EG021677 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 730256-732255 Theobroma cacao
Thecc1EG021677 2.0kb downstream 2.0kb downstream 5620 true scaffold_5: 732256-737875 Theobroma cacao
Thecc1EG021677 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 735876-737875 Theobroma cacao
Thecc1EG021677 5.0kb upstream 5.0kb upstream 8620 true scaffold_5: 727256-735875 Theobroma cacao
Thecc1EG021677 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 727256-732255 Theobroma cacao
Thecc1EG021677 5.0kb downstream 5.0kb downstream 8620 true scaffold_5: 732256-740875 Theobroma cacao
Thecc1EG021677 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 735876-740875 Theobroma cacao
Thecc1EG021677 10.0kb upstream 10.0kb upstream 13620 true scaffold_5: 722256-735875 Theobroma cacao
Thecc1EG021677 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 722256-732255 Theobroma cacao
Thecc1EG021677 10.0kb downstream 10.0kb downstream 13620 true scaffold_5: 732256-745875 Theobroma cacao
Thecc1EG021677 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 735876-745875 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838789 5264 Brassicales-Malvales View MSA
124338417 5266 SBM View MSA
124240620 5268 Malvidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain