Gene : Thecc1EG021678 T. cacao v1.1
Defline:  (1 of 1) PTHR35499//PTHR35499:SF2 - FAMILY NOT NAMED // ALC-INTERACTING PROTEIN 1 Genomic Order:  145
Name:  ? Thecc1EG021678 Secondary Identifier:  ? PAC:27422993
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021678 0.5kb upstream 0.5kb upstream 3639 true scaffold_5: 736246-739884 Theobroma cacao
Thecc1EG021678 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 736246-736745 Theobroma cacao
Thecc1EG021678 0.5kb downstream 0.5kb downstream 3639 true scaffold_5: 736746-740384 Theobroma cacao
Thecc1EG021678 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 739885-740384 Theobroma cacao
Thecc1EG021678 1.0kb upstream 1.0kb upstream 4139 true scaffold_5: 735746-739884 Theobroma cacao
Thecc1EG021678 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 735746-736745 Theobroma cacao
Thecc1EG021678 1.0kb downstream 1.0kb downstream 4139 true scaffold_5: 736746-740884 Theobroma cacao
Thecc1EG021678 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 739885-740884 Theobroma cacao
Thecc1EG021678 2.0kb upstream 2.0kb upstream 5139 true scaffold_5: 734746-739884 Theobroma cacao
Thecc1EG021678 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 734746-736745 Theobroma cacao
Thecc1EG021678 2.0kb downstream 2.0kb downstream 5139 true scaffold_5: 736746-741884 Theobroma cacao
Thecc1EG021678 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 739885-741884 Theobroma cacao
Thecc1EG021678 5.0kb upstream 5.0kb upstream 8139 true scaffold_5: 731746-739884 Theobroma cacao
Thecc1EG021678 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 731746-736745 Theobroma cacao
Thecc1EG021678 5.0kb downstream 5.0kb downstream 8139 true scaffold_5: 736746-744884 Theobroma cacao
Thecc1EG021678 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 739885-744884 Theobroma cacao
Thecc1EG021678 10.0kb upstream 10.0kb upstream 13139 true scaffold_5: 726746-739884 Theobroma cacao
Thecc1EG021678 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 726746-736745 Theobroma cacao
Thecc1EG021678 10.0kb downstream 10.0kb downstream 13139 true scaffold_5: 736746-749884 Theobroma cacao
Thecc1EG021678 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 739885-749884 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835053 5264 Brassicales-Malvales View MSA
124339401 5266 SBM View MSA
124253688 5268 Malvidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain