Gene : Thecc1EG021956 T. cacao v1.1
Defline:  (1 of 1) PTHR12548//PTHR12548:SF14 - TRANSCRIPTION FACTOR DP // TRANSCRIPTION FACTOR-LIKE PROTEIN DPA Genomic Order:  395
Name:  ? Thecc1EG021956 Secondary Identifier:  ? PAC:27422200
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021956 0.5kb upstream 0.5kb upstream 4239 true scaffold_5: 1941038-1945276 Theobroma cacao
Thecc1EG021956 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1944777-1945276 Theobroma cacao
Thecc1EG021956 0.5kb downstream 0.5kb downstream 4239 true scaffold_5: 1940538-1944776 Theobroma cacao
Thecc1EG021956 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1940538-1941037 Theobroma cacao
Thecc1EG021956 1.0kb upstream 1.0kb upstream 4739 true scaffold_5: 1941038-1945776 Theobroma cacao
Thecc1EG021956 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1944777-1945776 Theobroma cacao
Thecc1EG021956 1.0kb downstream 1.0kb downstream 4739 true scaffold_5: 1940038-1944776 Theobroma cacao
Thecc1EG021956 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1940038-1941037 Theobroma cacao
Thecc1EG021956 2.0kb upstream 2.0kb upstream 5739 true scaffold_5: 1941038-1946776 Theobroma cacao
Thecc1EG021956 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1944777-1946776 Theobroma cacao
Thecc1EG021956 2.0kb downstream 2.0kb downstream 5739 true scaffold_5: 1939038-1944776 Theobroma cacao
Thecc1EG021956 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1939038-1941037 Theobroma cacao
Thecc1EG021956 5.0kb upstream 5.0kb upstream 8739 true scaffold_5: 1941038-1949776 Theobroma cacao
Thecc1EG021956 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1944777-1949776 Theobroma cacao
Thecc1EG021956 5.0kb downstream 5.0kb downstream 8739 true scaffold_5: 1936038-1944776 Theobroma cacao
Thecc1EG021956 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1936038-1941037 Theobroma cacao
Thecc1EG021956 10.0kb upstream 10.0kb upstream 13739 true scaffold_5: 1941038-1954776 Theobroma cacao
Thecc1EG021956 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1944777-1954776 Theobroma cacao
Thecc1EG021956 10.0kb downstream 10.0kb downstream 13739 true scaffold_5: 1931038-1944776 Theobroma cacao
Thecc1EG021956 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1931038-1941037 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839640 5264 Brassicales-Malvales View MSA
124322629 5266 SBM View MSA
124169186 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain