Gene : Thecc1EG021927 T. cacao v1.1

Defline:  (1 of 2) PTHR31867//PTHR31867:SF9 - FAMILY NOT NAMED // EXPANSIN-A6 Genomic Order:  369
Name:  ? Thecc1EG021927 Secondary Identifier:  ? PAC:27424655

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021927 0.5kb upstream 0.5kb upstream 2504 true scaffold_5: 1801509-1804012 Theobroma cacao
Thecc1EG021927 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1801509-1802008 Theobroma cacao
Thecc1EG021927 0.5kb downstream 0.5kb downstream 2504 true scaffold_5: 1802009-1804512 Theobroma cacao
Thecc1EG021927 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1804013-1804512 Theobroma cacao
Thecc1EG021927 1.0kb upstream 1.0kb upstream 3004 true scaffold_5: 1801009-1804012 Theobroma cacao
Thecc1EG021927 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1801009-1802008 Theobroma cacao
Thecc1EG021927 1.0kb downstream 1.0kb downstream 3004 true scaffold_5: 1802009-1805012 Theobroma cacao
Thecc1EG021927 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1804013-1805012 Theobroma cacao
Thecc1EG021927 2.0kb upstream 2.0kb upstream 4004 true scaffold_5: 1800009-1804012 Theobroma cacao
Thecc1EG021927 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1800009-1802008 Theobroma cacao
Thecc1EG021927 2.0kb downstream 2.0kb downstream 4004 true scaffold_5: 1802009-1806012 Theobroma cacao
Thecc1EG021927 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1804013-1806012 Theobroma cacao
Thecc1EG021927 5.0kb upstream 5.0kb upstream 7004 true scaffold_5: 1797009-1804012 Theobroma cacao
Thecc1EG021927 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1797009-1802008 Theobroma cacao
Thecc1EG021927 5.0kb downstream 5.0kb downstream 7004 true scaffold_5: 1802009-1809012 Theobroma cacao
Thecc1EG021927 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1804013-1809012 Theobroma cacao
Thecc1EG021927 10.0kb upstream 10.0kb upstream 12004 true scaffold_5: 1792009-1804012 Theobroma cacao
Thecc1EG021927 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1792009-1802008 Theobroma cacao
Thecc1EG021927 10.0kb downstream 10.0kb downstream 12004 true scaffold_5: 1802009-1814012 Theobroma cacao
Thecc1EG021927 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1804013-1814012 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351028 5266 SBM View MSA
123839311 5264 Brassicales-Malvales View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain