Gene : Thecc1EG021899 T. cacao v1.1

Defline:  (1 of 1) K09562 - hsp70-interacting protein (HSPBP1) Genomic Order:  342
Name:  ? Thecc1EG021899 Secondary Identifier:  ? PAC:27424439

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021899 0.5kb upstream 0.5kb upstream 3240 true scaffold_5: 1674593-1677832 Theobroma cacao
Thecc1EG021899 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1677333-1677832 Theobroma cacao
Thecc1EG021899 0.5kb downstream 0.5kb downstream 3240 true scaffold_5: 1674093-1677332 Theobroma cacao
Thecc1EG021899 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1674093-1674592 Theobroma cacao
Thecc1EG021899 1.0kb upstream 1.0kb upstream 3740 true scaffold_5: 1674593-1678332 Theobroma cacao
Thecc1EG021899 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1677333-1678332 Theobroma cacao
Thecc1EG021899 1.0kb downstream 1.0kb downstream 3740 true scaffold_5: 1673593-1677332 Theobroma cacao
Thecc1EG021899 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1673593-1674592 Theobroma cacao
Thecc1EG021899 2.0kb upstream 2.0kb upstream 4740 true scaffold_5: 1674593-1679332 Theobroma cacao
Thecc1EG021899 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1677333-1679332 Theobroma cacao
Thecc1EG021899 2.0kb downstream 2.0kb downstream 4740 true scaffold_5: 1672593-1677332 Theobroma cacao
Thecc1EG021899 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1672593-1674592 Theobroma cacao
Thecc1EG021899 5.0kb upstream 5.0kb upstream 7740 true scaffold_5: 1674593-1682332 Theobroma cacao
Thecc1EG021899 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1677333-1682332 Theobroma cacao
Thecc1EG021899 5.0kb downstream 5.0kb downstream 7740 true scaffold_5: 1669593-1677332 Theobroma cacao
Thecc1EG021899 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1669593-1674592 Theobroma cacao
Thecc1EG021899 10.0kb upstream 10.0kb upstream 12740 true scaffold_5: 1674593-1687332 Theobroma cacao
Thecc1EG021899 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1677333-1687332 Theobroma cacao
Thecc1EG021899 10.0kb downstream 10.0kb downstream 12740 true scaffold_5: 1664593-1677332 Theobroma cacao
Thecc1EG021899 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1664593-1674592 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837605 5264 Brassicales-Malvales View MSA
124344808 5266 SBM View MSA
124242664 5268 Malvidae View MSA
124068639 5270 Rosid View MSA
123739823 5271 Pentapetalae View MSA
122792744 5272 Eudicot View MSA
122045261 5273 Angiosperm View MSA
121346137 5274 Embryophyte View MSA
123424210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain