Gene : Thecc1EG021907 T. cacao v1.1

Defline:  (1 of 1) PTHR37723:SF1 - FHL-3 Genomic Order:  351
Name:  ? Thecc1EG021907 Secondary Identifier:  ? PAC:27422568

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021907 0.5kb upstream 0.5kb upstream 3105 true scaffold_5: 1719575-1722679 Theobroma cacao
Thecc1EG021907 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1719575-1720074 Theobroma cacao
Thecc1EG021907 0.5kb downstream 0.5kb downstream 3105 true scaffold_5: 1720075-1723179 Theobroma cacao
Thecc1EG021907 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1722680-1723179 Theobroma cacao
Thecc1EG021907 1.0kb upstream 1.0kb upstream 3605 true scaffold_5: 1719075-1722679 Theobroma cacao
Thecc1EG021907 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1719075-1720074 Theobroma cacao
Thecc1EG021907 1.0kb downstream 1.0kb downstream 3605 true scaffold_5: 1720075-1723679 Theobroma cacao
Thecc1EG021907 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1722680-1723679 Theobroma cacao
Thecc1EG021907 2.0kb upstream 2.0kb upstream 4605 true scaffold_5: 1718075-1722679 Theobroma cacao
Thecc1EG021907 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1718075-1720074 Theobroma cacao
Thecc1EG021907 2.0kb downstream 2.0kb downstream 4605 true scaffold_5: 1720075-1724679 Theobroma cacao
Thecc1EG021907 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1722680-1724679 Theobroma cacao
Thecc1EG021907 5.0kb upstream 5.0kb upstream 7605 true scaffold_5: 1715075-1722679 Theobroma cacao
Thecc1EG021907 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1715075-1720074 Theobroma cacao
Thecc1EG021907 5.0kb downstream 5.0kb downstream 7605 true scaffold_5: 1720075-1727679 Theobroma cacao
Thecc1EG021907 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1722680-1727679 Theobroma cacao
Thecc1EG021907 10.0kb upstream 10.0kb upstream 12605 true scaffold_5: 1710075-1722679 Theobroma cacao
Thecc1EG021907 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1710075-1720074 Theobroma cacao
Thecc1EG021907 10.0kb downstream 10.0kb downstream 12605 true scaffold_5: 1720075-1732679 Theobroma cacao
Thecc1EG021907 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1722680-1732679 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791914 5273 Angiosperm View MSA
123824178 5264 Brassicales-Malvales View MSA
124347492 5266 SBM View MSA
124246502 5268 Malvidae View MSA
124070784 5270 Rosid View MSA
123746166 5271 Pentapetalae View MSA
122795270 5272 Eudicot View MSA
121063183 5274 Embryophyte View MSA
123102954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain