Gene : Thecc1EG021886 T. cacao v1.1

Defline:  (1 of 5) PTHR27007//PTHR27007:SF13 - FAMILY NOT NAMED // L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-RELATED Genomic Order:  331
Name:  ? Thecc1EG021886 Secondary Identifier:  ? PAC:27424092

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021886 0.5kb upstream 0.5kb upstream 3464 true scaffold_5: 1631165-1634628 Theobroma cacao
Thecc1EG021886 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1634129-1634628 Theobroma cacao
Thecc1EG021886 0.5kb downstream 0.5kb downstream 3464 true scaffold_5: 1630665-1634128 Theobroma cacao
Thecc1EG021886 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1630665-1631164 Theobroma cacao
Thecc1EG021886 1.0kb upstream 1.0kb upstream 3964 true scaffold_5: 1631165-1635128 Theobroma cacao
Thecc1EG021886 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1634129-1635128 Theobroma cacao
Thecc1EG021886 1.0kb downstream 1.0kb downstream 3964 true scaffold_5: 1630165-1634128 Theobroma cacao
Thecc1EG021886 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1630165-1631164 Theobroma cacao
Thecc1EG021886 2.0kb upstream 2.0kb upstream 4964 true scaffold_5: 1631165-1636128 Theobroma cacao
Thecc1EG021886 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1634129-1636128 Theobroma cacao
Thecc1EG021886 2.0kb downstream 2.0kb downstream 4964 true scaffold_5: 1629165-1634128 Theobroma cacao
Thecc1EG021886 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1629165-1631164 Theobroma cacao
Thecc1EG021886 5.0kb upstream 5.0kb upstream 7964 true scaffold_5: 1631165-1639128 Theobroma cacao
Thecc1EG021886 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1634129-1639128 Theobroma cacao
Thecc1EG021886 5.0kb downstream 5.0kb downstream 7964 true scaffold_5: 1626165-1634128 Theobroma cacao
Thecc1EG021886 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1626165-1631164 Theobroma cacao
Thecc1EG021886 10.0kb upstream 10.0kb upstream 12964 true scaffold_5: 1631165-1644128 Theobroma cacao
Thecc1EG021886 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1634129-1644128 Theobroma cacao
Thecc1EG021886 10.0kb downstream 10.0kb downstream 12964 true scaffold_5: 1621165-1634128 Theobroma cacao
Thecc1EG021886 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1621165-1631164 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838621 5264 Brassicales-Malvales View MSA
124338313 5266 SBM View MSA
124238794 5268 Malvidae View MSA
124063814 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain