Gene : Thecc1EG021849 T. cacao v1.1
Defline:  (1 of 1) PTHR12859 - PRA1 PROTEIN Genomic Order:  299
Name:  ? Thecc1EG021849 Secondary Identifier:  ? PAC:27421908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021849 0.5kb upstream 0.5kb upstream 3513 true scaffold_5: 1455393-1458905 Theobroma cacao
Thecc1EG021849 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1455393-1455892 Theobroma cacao
Thecc1EG021849 0.5kb downstream 0.5kb downstream 3513 true scaffold_5: 1455893-1459405 Theobroma cacao
Thecc1EG021849 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1458906-1459405 Theobroma cacao
Thecc1EG021849 1.0kb upstream 1.0kb upstream 4013 true scaffold_5: 1454893-1458905 Theobroma cacao
Thecc1EG021849 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1454893-1455892 Theobroma cacao
Thecc1EG021849 1.0kb downstream 1.0kb downstream 4013 true scaffold_5: 1455893-1459905 Theobroma cacao
Thecc1EG021849 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1458906-1459905 Theobroma cacao
Thecc1EG021849 2.0kb upstream 2.0kb upstream 5013 true scaffold_5: 1453893-1458905 Theobroma cacao
Thecc1EG021849 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1453893-1455892 Theobroma cacao
Thecc1EG021849 2.0kb downstream 2.0kb downstream 5013 true scaffold_5: 1455893-1460905 Theobroma cacao
Thecc1EG021849 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1458906-1460905 Theobroma cacao
Thecc1EG021849 5.0kb upstream 5.0kb upstream 8013 true scaffold_5: 1450893-1458905 Theobroma cacao
Thecc1EG021849 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1450893-1455892 Theobroma cacao
Thecc1EG021849 5.0kb downstream 5.0kb downstream 8013 true scaffold_5: 1455893-1463905 Theobroma cacao
Thecc1EG021849 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1458906-1463905 Theobroma cacao
Thecc1EG021849 10.0kb upstream 10.0kb upstream 13013 true scaffold_5: 1445893-1458905 Theobroma cacao
Thecc1EG021849 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1445893-1455892 Theobroma cacao
Thecc1EG021849 10.0kb downstream 10.0kb downstream 13013 true scaffold_5: 1455893-1468905 Theobroma cacao
Thecc1EG021849 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1458906-1468905 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041278 5273 Angiosperm View MSA
123834175 5264 Brassicales-Malvales View MSA
124341622 5266 SBM View MSA
124253109 5268 Malvidae View MSA
124062256 5270 Rosid View MSA
123752412 5271 Pentapetalae View MSA
122788524 5272 Eudicot View MSA
121345712 5274 Embryophyte View MSA
123428225 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain