Gene : Thecc1EG021836 T. cacao v1.1

Defline:  (1 of 15) KOG0752 - Mitochondrial solute carrier protein Genomic Order:  287
Name:  ? Thecc1EG021836 Secondary Identifier:  ? PAC:27423460

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021836 0.5kb upstream 0.5kb upstream 3766 true scaffold_5: 1412158-1415923 Theobroma cacao
Thecc1EG021836 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1412158-1412657 Theobroma cacao
Thecc1EG021836 0.5kb downstream 0.5kb downstream 3766 true scaffold_5: 1412658-1416423 Theobroma cacao
Thecc1EG021836 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1415924-1416423 Theobroma cacao
Thecc1EG021836 1.0kb upstream 1.0kb upstream 4266 true scaffold_5: 1411658-1415923 Theobroma cacao
Thecc1EG021836 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1411658-1412657 Theobroma cacao
Thecc1EG021836 1.0kb downstream 1.0kb downstream 4266 true scaffold_5: 1412658-1416923 Theobroma cacao
Thecc1EG021836 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1415924-1416923 Theobroma cacao
Thecc1EG021836 2.0kb upstream 2.0kb upstream 5266 true scaffold_5: 1410658-1415923 Theobroma cacao
Thecc1EG021836 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1410658-1412657 Theobroma cacao
Thecc1EG021836 2.0kb downstream 2.0kb downstream 5266 true scaffold_5: 1412658-1417923 Theobroma cacao
Thecc1EG021836 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1415924-1417923 Theobroma cacao
Thecc1EG021836 5.0kb upstream 5.0kb upstream 8266 true scaffold_5: 1407658-1415923 Theobroma cacao
Thecc1EG021836 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1407658-1412657 Theobroma cacao
Thecc1EG021836 5.0kb downstream 5.0kb downstream 8266 true scaffold_5: 1412658-1420923 Theobroma cacao
Thecc1EG021836 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1415924-1420923 Theobroma cacao
Thecc1EG021836 10.0kb upstream 10.0kb upstream 13266 true scaffold_5: 1402658-1415923 Theobroma cacao
Thecc1EG021836 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1402658-1412657 Theobroma cacao
Thecc1EG021836 10.0kb downstream 10.0kb downstream 13266 true scaffold_5: 1412658-1425923 Theobroma cacao
Thecc1EG021836 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1415924-1425923 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832355 5264 Brassicales-Malvales View MSA
124342684 5266 SBM View MSA
124243704 5268 Malvidae View MSA
124069911 5270 Rosid View MSA
123736580 5271 Pentapetalae View MSA
122788448 5272 Eudicot View MSA
122045339 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121344279 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain