Gene : Thecc1EG021817 T. cacao v1.1
Defline:  (1 of 37) PF00582 - Universal stress protein family (Usp) Genomic Order:  269
Name:  ? Thecc1EG021817 Secondary Identifier:  ? PAC:27424565
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021817 0.5kb upstream 0.5kb upstream 6485 true scaffold_5: 1330613-1337097 Theobroma cacao
Thecc1EG021817 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1330613-1331112 Theobroma cacao
Thecc1EG021817 0.5kb downstream 0.5kb downstream 6485 true scaffold_5: 1331113-1337597 Theobroma cacao
Thecc1EG021817 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1337098-1337597 Theobroma cacao
Thecc1EG021817 1.0kb upstream 1.0kb upstream 6985 true scaffold_5: 1330113-1337097 Theobroma cacao
Thecc1EG021817 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1330113-1331112 Theobroma cacao
Thecc1EG021817 1.0kb downstream 1.0kb downstream 6985 true scaffold_5: 1331113-1338097 Theobroma cacao
Thecc1EG021817 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1337098-1338097 Theobroma cacao
Thecc1EG021817 2.0kb upstream 2.0kb upstream 7985 true scaffold_5: 1329113-1337097 Theobroma cacao
Thecc1EG021817 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1329113-1331112 Theobroma cacao
Thecc1EG021817 2.0kb downstream 2.0kb downstream 7985 true scaffold_5: 1331113-1339097 Theobroma cacao
Thecc1EG021817 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1337098-1339097 Theobroma cacao
Thecc1EG021817 5.0kb upstream 5.0kb upstream 10985 true scaffold_5: 1326113-1337097 Theobroma cacao
Thecc1EG021817 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1326113-1331112 Theobroma cacao
Thecc1EG021817 5.0kb downstream 5.0kb downstream 10985 true scaffold_5: 1331113-1342097 Theobroma cacao
Thecc1EG021817 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1337098-1342097 Theobroma cacao
Thecc1EG021817 10.0kb upstream 10.0kb upstream 15985 true scaffold_5: 1321113-1337097 Theobroma cacao
Thecc1EG021817 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1321113-1331112 Theobroma cacao
Thecc1EG021817 10.0kb downstream 10.0kb downstream 15985 true scaffold_5: 1331113-1347097 Theobroma cacao
Thecc1EG021817 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1337098-1347097 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834842 5264 Brassicales-Malvales View MSA
124350362 5266 SBM View MSA
124243263 5268 Malvidae View MSA
124061330 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain