Gene : Thecc1EG021802 T. cacao v1.1
Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  254
Name:  ? Thecc1EG021802 Secondary Identifier:  ? PAC:27424116
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021802 0.5kb upstream 0.5kb upstream 2911 true scaffold_5: 1273157-1276067 Theobroma cacao
Thecc1EG021802 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1275568-1276067 Theobroma cacao
Thecc1EG021802 0.5kb downstream 0.5kb downstream 2911 true scaffold_5: 1272657-1275567 Theobroma cacao
Thecc1EG021802 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1272657-1273156 Theobroma cacao
Thecc1EG021802 1.0kb upstream 1.0kb upstream 3411 true scaffold_5: 1273157-1276567 Theobroma cacao
Thecc1EG021802 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1275568-1276567 Theobroma cacao
Thecc1EG021802 1.0kb downstream 1.0kb downstream 3411 true scaffold_5: 1272157-1275567 Theobroma cacao
Thecc1EG021802 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1272157-1273156 Theobroma cacao
Thecc1EG021802 2.0kb upstream 2.0kb upstream 4411 true scaffold_5: 1273157-1277567 Theobroma cacao
Thecc1EG021802 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1275568-1277567 Theobroma cacao
Thecc1EG021802 2.0kb downstream 2.0kb downstream 4411 true scaffold_5: 1271157-1275567 Theobroma cacao
Thecc1EG021802 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1271157-1273156 Theobroma cacao
Thecc1EG021802 5.0kb upstream 5.0kb upstream 7411 true scaffold_5: 1273157-1280567 Theobroma cacao
Thecc1EG021802 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1275568-1280567 Theobroma cacao
Thecc1EG021802 5.0kb downstream 5.0kb downstream 7411 true scaffold_5: 1268157-1275567 Theobroma cacao
Thecc1EG021802 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1268157-1273156 Theobroma cacao
Thecc1EG021802 10.0kb upstream 10.0kb upstream 12411 true scaffold_5: 1273157-1285567 Theobroma cacao
Thecc1EG021802 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1275568-1285567 Theobroma cacao
Thecc1EG021802 10.0kb downstream 10.0kb downstream 12411 true scaffold_5: 1263157-1275567 Theobroma cacao
Thecc1EG021802 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1263157-1273156 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820063 5264 Brassicales-Malvales Singleton cluster - no MSA
124316287 5266 SBM Singleton cluster - no MSA
124255258 5268 Malvidae View MSA
124051242 5270 Rosid View MSA
123753438 5271 Pentapetalae View MSA
122775106 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain